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4G72

Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus

Functional Information from GO Data
ChainGOidnamespacecontents
A0004129molecular_functioncytochrome-c oxidase activity
A0005886cellular_componentplasma membrane
A0006119biological_processoxidative phosphorylation
A0006811biological_processmonoatomic ion transport
A0009060biological_processaerobic respiration
A0016020cellular_componentmembrane
A0020037molecular_functionheme binding
A0022904biological_processrespiratory electron transport chain
A0046872molecular_functionmetal ion binding
A1902600biological_processproton transmembrane transport
B0004129molecular_functioncytochrome-c oxidase activity
B0005507molecular_functioncopper ion binding
B0005886cellular_componentplasma membrane
B0016020cellular_componentmembrane
B0022904biological_processrespiratory electron transport chain
B0046872molecular_functionmetal ion binding
B1902600biological_processproton transmembrane transport
C0004129molecular_functioncytochrome-c oxidase activity
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0022904biological_processrespiratory electron transport chain
C1902600biological_processproton transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU A 601
ChainResidue
AHIS233
AHIS282
AHIS283
AHAS603
APER604

site_idAC2
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM A 602
ChainResidue
AALA43
ATYR46
ATYR65
ALEU69
AHIS72
AASN76
AALA77
ALEU132
ATYR133
APHE385
AHIS386
AALA390
ATHR394
AMET432
AMET435
AARG449
AARG450
AALA451
ALEU477
ALEU32
AGLY39
APRO40
AGLN42

site_idAC3
Number of Residues26
DetailsBINDING SITE FOR RESIDUE HAS A 603
ChainResidue
ATYR133
ATRP229
AMET236
ATYR237
ATYR244
AHIS282
AHIS283
ASER309
AALA313
AVAL350
ALEU353
APHE356
AGLY363
AASN366
AALA367
AASP372
AHIS376
AHIS384
APHE385
AGLN388
AVAL389
AARG449
ACU601
APER604
AHOH701
CVAL11

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PER A 604
ChainResidue
AHIS233
AMET236
AHIS283
ACU601
AHAS603

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE OLC A 605
ChainResidue
ALEU105
AVAL158
ATYR161
AILE475
AVAL479
AOLC614

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE OLC A 606
ChainResidue
APHE213
ALEU215
ATRP341
ATRP426
AOLC609
AOLC613
AOLC614
AOLC615

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OLC A 607
ChainResidue
ATRP441
ALEU444
BTYR145
BHOH310
CARG33

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OLC A 608
ChainResidue
ATHR293
AMET296
AILE297
BHOH301

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE OLC A 609
ChainResidue
ATRP143
ASER212
APHE213
AGLY214
ALEU430
AOLC606
AOLC616

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE OLC A 610
ChainResidue
ATRP111
AVAL465
AOLC613

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE OLC A 611
ChainResidue
ATYR161
AARG168

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OLC A 612
ChainResidue
ATRP167
AARG168
ALYS171
AGLY528

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE OLC A 613
ChainResidue
ALEU108
AVAL468
AOLC606
AOLC610
AOLC614
AGLY104

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE OLC A 614
ChainResidue
AGLY104
ALEU105
AMET112
AVAL151
AOLC605
AOLC606
AOLC613

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OLC A 615
ChainResidue
AASP415
AALA416
AARG419
AOLC606

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OLC A 616
ChainResidue
AARG337
ATRP341
APHE429
ALEU430
AOLC609

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CUA B 201
ChainResidue
BHIS114
BCYS149
BGLN151
BCYS153
BHIS157
BMET160

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OLC B 202
ChainResidue
BPHE21
BLEU32
BTYR35
BOLC203

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE OLC B 203
ChainResidue
BALA13
BTYR14
BGLY17
BTRP18
BTYR35
BOLC202

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OLC C 101
ChainResidue
CPHE22
CGLY25
CVAL29
COLC102

site_idCC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE OLC C 102
ChainResidue
COLC101

Functional Information from PROSITE/UniProt
site_idPS00078
Number of Residues49
DetailsCOX2 CO II and nitrous oxide reductase dinuclear copper centers signature. ViHgfhvegtninvevlpgevstvrytfkrpgeyrii......CnqyCglgHqnM
ChainResidueDetails
BVAL112-MET160

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues260
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"description":"axial binding residue","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsCross-link: {"description":"1'-histidyl-3'-tyrosine (His-Tyr)"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues64
DetailsTransmembrane: {"description":"Helical"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues129
DetailsTopological domain: {"description":"Periplasmic"}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 735
ChainResidueDetails
BPHE86electron shuttle
BPHE88electron shuttle
AHIS384electron shuttle
APHE385electron shuttle
AHIS386electron shuttle
AARG449electron shuttle
AARG450electron shuttle

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PDB entries from 2025-12-24

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