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4FYX

E. coli Aspartate Transcarbamoylase complexed with dCTP, UTP, and Mg2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0004070molecular_functionaspartate carbamoyltransferase activity
A0004088molecular_functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006520biological_processamino acid metabolic process
A0006541biological_processglutamine metabolic process
A0009347cellular_componentaspartate carbamoyltransferase complex
A0016597molecular_functionamino acid binding
A0016740molecular_functiontransferase activity
A0016743molecular_functioncarboxyl- or carbamoyltransferase activity
A0042802molecular_functionidentical protein binding
A0044205biological_process'de novo' UMP biosynthetic process
A0070207biological_processprotein homotrimerization
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0008270molecular_functionzinc ion binding
B0009347cellular_componentaspartate carbamoyltransferase complex
B0046872molecular_functionmetal ion binding
C0004070molecular_functionaspartate carbamoyltransferase activity
C0004088molecular_functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
C0006221biological_processpyrimidine nucleotide biosynthetic process
C0006520biological_processamino acid metabolic process
C0006541biological_processglutamine metabolic process
C0009347cellular_componentaspartate carbamoyltransferase complex
C0016597molecular_functionamino acid binding
C0016740molecular_functiontransferase activity
C0016743molecular_functioncarboxyl- or carbamoyltransferase activity
C0042802molecular_functionidentical protein binding
C0044205biological_process'de novo' UMP biosynthetic process
C0070207biological_processprotein homotrimerization
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
D0006221biological_processpyrimidine nucleotide biosynthetic process
D0008270molecular_functionzinc ion binding
D0009347cellular_componentaspartate carbamoyltransferase complex
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 201
ChainResidue
BCYS109
BCYS114
BCYS138
BCYS141

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE UTP B 202
ChainResidue
BLEU48
BPRO49
BSER50
BGLY51
BGLU52
BLYS56
BLEU58
BLYS60
BDCP203
BMG204
BHOH306
BHOH307
BHOH312
BLYS6
BLEU7
BGLN8
BVAL9
BHIS20

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE DCP B 203
ChainResidue
BALA11
BILE12
BVAL17
BASP19
BHIS20
BLYS60
BASN84
BTYR89
BVAL91
BLYS94
BUTP202
BMG204
BHOH306
BHOH307
BHOH330
BHOH338
BHOH378
BHOH398

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 204
ChainResidue
BUTP202
BDCP203
BHOH306
BHOH307

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 201
ChainResidue
DCYS109
DCYS114
DCYS138
DCYS141

site_idAC6
Number of Residues17
DetailsBINDING SITE FOR RESIDUE UTP D 202
ChainResidue
DLYS6
DLEU7
DGLN8
DVAL9
DHIS20
DPRO49
DSER50
DGLY51
DGLU52
DLYS56
DLEU58
DLYS60
DDCP203
DMG204
DHOH320
DHOH321
DHOH395

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE DCP D 203
ChainResidue
DALA11
DILE12
DVAL17
DASP19
DHIS20
DLYS60
DASN84
DILE86
DTYR89
DVAL91
DLYS94
DUTP202
DMG204
DHOH316
DHOH320
DHOH321
DHOH360
DHOH396

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG D 204
ChainResidue
DUTP202
DDCP203
DHOH320
DHOH321

Functional Information from PROSITE/UniProt
site_idPS00097
Number of Residues8
DetailsCARBAMOYLTRANSFERASE Aspartate and ornithine carbamoyltransferases signature. FfEaSTRT
ChainResidueDetails
APHE48-THR55

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
BCYS109
CARG105
CHIS134
CGLN137
CLEU267
CPRO268
BCYS114
BCYS138
BCYS141
DCYS109
DCYS114
DCYS138
DCYS141
CTHR55

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00001, ECO:0000305|PubMed:3380787
ChainResidueDetails
ALYS84
AARG167
AARG229
CLYS84
CARG167
CARG229

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 405
ChainResidueDetails
AARG54electrostatic stabiliser
ATHR55electrostatic stabiliser, increase electrophilicity
ALYS84proton shuttle (general acid/base)
AARG105electrostatic stabiliser, increase electrophilicity
AHIS134electrostatic stabiliser, increase electrophilicity

site_idMCSA2
Number of Residues5
DetailsM-CSA 405
ChainResidueDetails
CARG54electrostatic stabiliser
CTHR55electrostatic stabiliser, increase electrophilicity
CLYS84proton shuttle (general acid/base)
CARG105electrostatic stabiliser, increase electrophilicity
CHIS134electrostatic stabiliser, increase electrophilicity

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PDB entries from 2024-10-16

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