4FYK
Crystal structure of rcl with 5'-phiosphorothioate-adenosine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0009159 | biological_process | deoxyribonucleoside monophosphate catabolic process |
| A | 0070694 | molecular_function | deoxyribonucleoside 5'-monophosphate N-glycosidase activity |
| B | 0009159 | biological_process | deoxyribonucleoside monophosphate catabolic process |
| B | 0070694 | molecular_function | deoxyribonucleoside 5'-monophosphate N-glycosidase activity |
| C | 0009159 | biological_process | deoxyribonucleoside monophosphate catabolic process |
| C | 0070694 | molecular_function | deoxyribonucleoside 5'-monophosphate N-glycosidase activity |
| D | 0009159 | biological_process | deoxyribonucleoside monophosphate catabolic process |
| D | 0070694 | molecular_function | deoxyribonucleoside 5'-monophosphate N-glycosidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE SRA A 201 |
| Chain | Residue |
| A | CYS15 |
| A | GLY89 |
| A | GLU93 |
| A | HOH309 |
| A | HOH315 |
| A | HOH423 |
| A | HOH457 |
| B | SER117 |
| B | ALA118 |
| B | MET119 |
| A | GLY16 |
| A | ILE18 |
| A | ARG19 |
| A | GLY20 |
| A | GLU44 |
| A | ILE65 |
| A | ASN69 |
| A | SER87 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 202 |
| Chain | Residue |
| A | ARG37 |
| B | SER33 |
| B | ARG36 |
| site_id | AC3 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE SRA B 201 |
| Chain | Residue |
| A | SER117 |
| A | ALA118 |
| A | MET119 |
| B | CYS15 |
| B | GLY16 |
| B | ILE18 |
| B | ARG19 |
| B | GLY20 |
| B | ILE65 |
| B | ASN69 |
| B | SER87 |
| B | GLY89 |
| B | GLU93 |
| B | HOH302 |
| B | HOH331 |
| B | HOH376 |
| B | HOH439 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 202 |
| Chain | Residue |
| A | SER33 |
| B | ARG34 |
| B | ARG37 |
| site_id | AC5 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE SRA C 201 |
| Chain | Residue |
| C | CYS15 |
| C | GLY16 |
| C | ILE18 |
| C | ARG19 |
| C | GLY20 |
| C | ILE65 |
| C | ASN69 |
| C | SER87 |
| C | GLY89 |
| C | VAL90 |
| C | GLU93 |
| C | HOH303 |
| C | HOH324 |
| C | HOH325 |
| C | HOH395 |
| C | HOH405 |
| D | SER117 |
| D | ALA118 |
| D | MET119 |
| site_id | AC6 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE SRA D 201 |
| Chain | Residue |
| C | SER117 |
| C | ALA118 |
| C | MET119 |
| D | CYS15 |
| D | GLY16 |
| D | ILE18 |
| D | ARG19 |
| D | GLY20 |
| D | ILE65 |
| D | ASN69 |
| D | SER87 |
| D | GLY89 |
| D | GLU93 |
| D | HOH302 |
| D | HOH319 |
| D | HOH344 |
| D | HOH394 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 D 202 |
| Chain | Residue |
| C | SER33 |
| C | ARG36 |
| D | ARG34 |
| D | ARG37 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 28 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:23385460, ECO:0000269|PubMed:24260472, ECO:0000269|PubMed:25108359, ECO:0007744|PDB:4FYH, ECO:0007744|PDB:4FYI, ECO:0007744|PDB:4FYK, ECO:0007744|PDB:4KXL, ECO:0007744|PDB:4KXM, ECO:0007744|PDB:4KXN, ECO:0007744|PDB:4P5D |
| Chain | Residue | Details |
| A | GLY16 | |
| B | ARG19 | |
| B | GLY20 | |
| B | SER87 | |
| B | GLY89 | |
| B | GLU93 | |
| C | GLY16 | |
| C | ILE18 | |
| C | ARG19 | |
| C | GLY20 | |
| C | SER87 | |
| A | ILE18 | |
| C | GLY89 | |
| C | GLU93 | |
| D | GLY16 | |
| D | ILE18 | |
| D | ARG19 | |
| D | GLY20 | |
| D | SER87 | |
| D | GLY89 | |
| D | GLU93 | |
| A | ARG19 | |
| A | GLY20 | |
| A | SER87 | |
| A | GLY89 | |
| A | GLU93 | |
| B | GLY16 | |
| B | ILE18 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | BINDING: in other chain => ECO:0000269|PubMed:23385460, ECO:0000269|PubMed:24260472, ECO:0000269|PubMed:25108359, ECO:0007744|PDB:4FYH, ECO:0007744|PDB:4FYI, ECO:0007744|PDB:4FYK, ECO:0007744|PDB:4KXL, ECO:0007744|PDB:4KXM, ECO:0007744|PDB:4KXN, ECO:0007744|PDB:4P5D |
| Chain | Residue | Details |
| A | SER117 | |
| B | SER117 | |
| C | SER117 | |
| D | SER117 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 16 |
| Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:O43598 |
| Chain | Residue | Details |
| A | SER17 | |
| C | SER87 | |
| C | SER112 | |
| C | SER127 | |
| D | SER17 | |
| D | SER87 | |
| D | SER112 | |
| D | SER127 | |
| A | SER87 | |
| A | SER112 | |
| A | SER127 | |
| B | SER17 | |
| B | SER87 | |
| B | SER112 | |
| B | SER127 | |
| C | SER17 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:22673903 |
| Chain | Residue | Details |
| A | SER117 | |
| B | SER117 | |
| C | SER117 | |
| D | SER117 |
