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4FP9

Human MTERF4-NSUN4 protein complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000957biological_processmitochondrial RNA catabolic process
A0001510biological_processRNA methylation
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005762cellular_componentmitochondrial large ribosomal subunit
A0006364biological_processrRNA processing
A0006396biological_processRNA processing
A0008168molecular_functionmethyltransferase activity
A0008173molecular_functionRNA methyltransferase activity
A0008649molecular_functionrRNA methyltransferase activity
A0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
A0009383molecular_functionrRNA (cytosine-C5-)-methyltransferase activity
A0016740molecular_functiontransferase activity
A0019843molecular_functionrRNA binding
A0031167biological_processrRNA methylation
A0032259biological_processmethylation
A0042254biological_processribosome biogenesis
A0062152molecular_functionmRNA (cytidine-5-)-methyltransferase activity
A1900864biological_processmitochondrial RNA modification
A1902775biological_processmitochondrial large ribosomal subunit assembly
A1990400molecular_functionmitochondrial ribosomal large subunit rRNA binding
B0003676molecular_functionnucleic acid binding
B0043231cellular_componentintracellular membrane-bounded organelle
C0000957biological_processmitochondrial RNA catabolic process
C0001510biological_processRNA methylation
C0003723molecular_functionRNA binding
C0005515molecular_functionprotein binding
C0005739cellular_componentmitochondrion
C0005759cellular_componentmitochondrial matrix
C0005762cellular_componentmitochondrial large ribosomal subunit
C0006364biological_processrRNA processing
C0006396biological_processRNA processing
C0008168molecular_functionmethyltransferase activity
C0008173molecular_functionRNA methyltransferase activity
C0008649molecular_functionrRNA methyltransferase activity
C0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
C0009383molecular_functionrRNA (cytosine-C5-)-methyltransferase activity
C0016740molecular_functiontransferase activity
C0019843molecular_functionrRNA binding
C0031167biological_processrRNA methylation
C0032259biological_processmethylation
C0042254biological_processribosome biogenesis
C0062152molecular_functionmRNA (cytidine-5-)-methyltransferase activity
C1900864biological_processmitochondrial RNA modification
C1902775biological_processmitochondrial large ribosomal subunit assembly
C1990400molecular_functionmitochondrial ribosomal large subunit rRNA binding
D0000957biological_processmitochondrial RNA catabolic process
D0001510biological_processRNA methylation
D0003723molecular_functionRNA binding
D0005515molecular_functionprotein binding
D0005739cellular_componentmitochondrion
D0005759cellular_componentmitochondrial matrix
D0005762cellular_componentmitochondrial large ribosomal subunit
D0006364biological_processrRNA processing
D0006396biological_processRNA processing
D0008168molecular_functionmethyltransferase activity
D0008173molecular_functionRNA methyltransferase activity
D0008649molecular_functionrRNA methyltransferase activity
D0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
D0009383molecular_functionrRNA (cytosine-C5-)-methyltransferase activity
D0016740molecular_functiontransferase activity
D0019843molecular_functionrRNA binding
D0031167biological_processrRNA methylation
D0032259biological_processmethylation
D0042254biological_processribosome biogenesis
D0062152molecular_functionmRNA (cytidine-5-)-methyltransferase activity
D1900864biological_processmitochondrial RNA modification
D1902775biological_processmitochondrial large ribosomal subunit assembly
D1990400molecular_functionmitochondrial ribosomal large subunit rRNA binding
E0003676molecular_functionnucleic acid binding
E0043231cellular_componentintracellular membrane-bounded organelle
F0000957biological_processmitochondrial RNA catabolic process
F0001510biological_processRNA methylation
F0003723molecular_functionRNA binding
F0005515molecular_functionprotein binding
F0005739cellular_componentmitochondrion
F0005759cellular_componentmitochondrial matrix
F0005762cellular_componentmitochondrial large ribosomal subunit
F0006364biological_processrRNA processing
F0006396biological_processRNA processing
F0008168molecular_functionmethyltransferase activity
F0008173molecular_functionRNA methyltransferase activity
F0008649molecular_functionrRNA methyltransferase activity
F0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
F0009383molecular_functionrRNA (cytosine-C5-)-methyltransferase activity
F0016740molecular_functiontransferase activity
F0019843molecular_functionrRNA binding
F0031167biological_processrRNA methylation
F0032259biological_processmethylation
F0042254biological_processribosome biogenesis
F0062152molecular_functionmRNA (cytidine-5-)-methyltransferase activity
F1900864biological_processmitochondrial RNA modification
F1902775biological_processmitochondrial large ribosomal subunit assembly
F1990400molecular_functionmitochondrial ribosomal large subunit rRNA binding
G0003676molecular_functionnucleic acid binding
G0043231cellular_componentintracellular membrane-bounded organelle
H0003676molecular_functionnucleic acid binding
H0043231cellular_componentintracellular membrane-bounded organelle
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SAM A 401
ChainResidue
ACYS181
AARG209
AASP237
AGLY238
AASP255
APRO257
ALEU291
AALA182
AALA183
APRO184
AGLY185
AGLY186
ALYS187
AASP204
ALEU205

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 402
ChainResidue
AARG345
AARG346

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 401
ChainResidue
BARG190
BGLN191

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SAM C 401
ChainResidue
CCYS181
CALA182
CALA183
CPRO184
CGLY185
CGLY186
CLYS187
CASP204
CLEU205
CARG209
CASP237
CGLY238
CASP255
CPRO257
CLEU291

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 402
ChainResidue
CARG345
CARG346

site_idAC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SAM D 401
ChainResidue
DCYS181
DALA182
DALA183
DPRO184
DGLY185
DGLY186
DLYS187
DASP204
DLEU205
DARG209
DASP237
DGLY238
DASP255
DPRO257
DLEU291

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 402
ChainResidue
BLYS161
DSER140
DARG141
GARG322

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 D 403
ChainResidue
DARG345
DARG346

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 404
ChainResidue
DGLN71
DHIS263
DHIS266

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 E 401
ChainResidue
ETYR238
ELYS244
EHIS245

site_idBC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SAM F 401
ChainResidue
FCYS181
FALA182
FALA183
FPRO184
FGLY185
FGLY186
FLYS187
FASP204
FLEU205
FARG209
FASP237
FGLY238
FASP255
FPRO257
FLEU291

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 F 402
ChainResidue
FARG345
FARG346

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"22949673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22949673","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4FP9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues20
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22949673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4FP9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4FZV","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"22949673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4FP9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4FZV","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues120
DetailsRepeat: {"description":"MTERF 1","evidences":[{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues108
DetailsRepeat: {"description":"MTERF 2","evidences":[{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues120
DetailsRepeat: {"description":"MTERF 3","evidences":[{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues100
DetailsRepeat: {"description":"MTERF 4","evidences":[{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues112
DetailsRepeat: {"description":"MTERF 5","evidences":[{"source":"PubMed","id":"23022348","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues68
DetailsRegion: {"description":"Dimerization with NSUN4"}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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