4FMG
Merkel Cell Polyomavirus VP1 Unassembled Pentamer
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005198 | molecular_function | structural molecule activity |
| A | 0019028 | cellular_component | viral capsid |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0005198 | molecular_function | structural molecule activity |
| C | 0019028 | cellular_component | viral capsid |
| D | 0005198 | molecular_function | structural molecule activity |
| D | 0019028 | cellular_component | viral capsid |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| G | 0005198 | molecular_function | structural molecule activity |
| G | 0019028 | cellular_component | viral capsid |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| I | 0005198 | molecular_function | structural molecule activity |
| I | 0019028 | cellular_component | viral capsid |
| J | 0005198 | molecular_function | structural molecule activity |
| J | 0019028 | cellular_component | viral capsid |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| L | 0005198 | molecular_function | structural molecule activity |
| L | 0019028 | cellular_component | viral capsid |
| M | 0005198 | molecular_function | structural molecule activity |
| M | 0019028 | cellular_component | viral capsid |
| N | 0005198 | molecular_function | structural molecule activity |
| N | 0019028 | cellular_component | viral capsid |
| O | 0005198 | molecular_function | structural molecule activity |
| O | 0019028 | cellular_component | viral capsid |
| P | 0005198 | molecular_function | structural molecule activity |
| P | 0019028 | cellular_component | viral capsid |
| Q | 0005198 | molecular_function | structural molecule activity |
| Q | 0019028 | cellular_component | viral capsid |
| R | 0005198 | molecular_function | structural molecule activity |
| R | 0019028 | cellular_component | viral capsid |
| S | 0005198 | molecular_function | structural molecule activity |
| S | 0019028 | cellular_component | viral capsid |
| T | 0005198 | molecular_function | structural molecule activity |
| T | 0019028 | cellular_component | viral capsid |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 501 |
| Chain | Residue |
| A | ASN75 |
| A | TRP76 |
| A | TYR143 |
| A | TRP144 |
| B | ASP181 |
| B | GLN183 |
| B | HOH556 |
| B | HOH564 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 502 |
| Chain | Residue |
| A | GLN248 |
| A | VAL256 |
| A | CL504 |
| A | HOH637 |
| A | HOH749 |
| A | ASN162 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 503 |
| Chain | Residue |
| A | LYS147 |
| A | ARG148 |
| A | HIS150 |
| A | ASP151 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL A 504 |
| Chain | Residue |
| A | HIS164 |
| A | SER246 |
| A | ILE247 |
| A | GLN248 |
| A | GOL502 |
| A | HOH606 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL B 401 |
| Chain | Residue |
| B | ASN162 |
| B | GLN248 |
| B | PRO254 |
| B | THR255 |
| B | VAL256 |
| B | CL403 |
| B | HOH625 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 402 |
| Chain | Residue |
| B | LYS147 |
| B | ARG148 |
| B | HIS150 |
| B | ASP151 |
| B | HOH561 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL B 403 |
| Chain | Residue |
| B | HIS164 |
| B | SER246 |
| B | ILE247 |
| B | GLN248 |
| B | GOL401 |
| B | HOH506 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL C 401 |
| Chain | Residue |
| C | ASN162 |
| C | GLN248 |
| C | PRO254 |
| C | THR255 |
| C | VAL256 |
| C | CL403 |
| C | HOH564 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 402 |
| Chain | Residue |
| C | LYS147 |
| C | ARG148 |
| C | ASP151 |
| C | HOH538 |
| C | HOH571 |
| C | HOH656 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL C 403 |
| Chain | Residue |
| C | HIS164 |
| C | SER246 |
| C | ILE247 |
| C | GLN248 |
| C | GOL401 |
| C | HOH555 |
| site_id | BC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL D 501 |
| Chain | Residue |
| D | ASN75 |
| D | TRP76 |
| D | TYR143 |
| D | TRP144 |
| D | HOH724 |
| E | ASP181 |
| E | GLN183 |
| E | GLN210 |
| E | HOH645 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL D 502 |
| Chain | Residue |
| D | ASN162 |
| D | HIS164 |
| D | GLN248 |
| D | PRO254 |
| D | VAL256 |
| D | CL503 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL D 503 |
| Chain | Residue |
| D | HIS164 |
| D | SER246 |
| D | ILE247 |
| D | GOL502 |
| D | HOH612 |
| site_id | BC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL E 401 |
| Chain | Residue |
| E | ASN162 |
| E | GLN248 |
| E | PRO254 |
| E | THR255 |
| E | VAL256 |
| E | CL402 |
| site_id | BC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CL E 402 |
| Chain | Residue |
| E | ASN162 |
| E | HIS164 |
| E | SER246 |
| E | ILE247 |
| E | GLN248 |
| E | GOL401 |
| E | HOH627 |
| site_id | BC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL F 401 |
| Chain | Residue |
| F | CL403 |
| F | HOH533 |
| F | HIS164 |
| F | GLN248 |
| F | PRO254 |
| F | THR255 |
| F | VAL256 |
| site_id | BC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL F 402 |
| Chain | Residue |
| F | LYS147 |
| F | ARG148 |
| F | ASP151 |
| F | HOH529 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL F 403 |
| Chain | Residue |
| F | ASN162 |
| F | HIS164 |
| F | SER246 |
| F | ILE247 |
| F | GOL401 |
| site_id | CC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL G 401 |
| Chain | Residue |
| G | ASN162 |
| G | HIS164 |
| G | GLN248 |
| G | PRO254 |
| G | VAL256 |
| G | CL402 |
| site_id | CC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL G 402 |
| Chain | Residue |
| G | HIS164 |
| G | SER246 |
| G | ILE247 |
| G | GLN248 |
| G | GOL401 |
| G | HOH518 |
| site_id | CC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL H 401 |
| Chain | Residue |
| H | ASN162 |
| H | GLN248 |
| H | PRO254 |
| H | THR255 |
| H | VAL256 |
| H | CL403 |
| site_id | CC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL H 402 |
| Chain | Residue |
| H | LYS147 |
| H | ARG148 |
| H | HIS150 |
| H | ASP151 |
| H | HOH639 |
| site_id | CC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL H 403 |
| Chain | Residue |
| H | HIS164 |
| H | SER246 |
| H | ILE247 |
| H | GOL401 |
| H | HOH504 |
| site_id | CC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL I 401 |
| Chain | Residue |
| I | ASN162 |
| I | HIS164 |
| I | GLN248 |
| I | PRO254 |
| I | THR255 |
| I | VAL256 |
| I | CL403 |
| site_id | CC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL I 402 |
| Chain | Residue |
| I | HIS164 |
| I | PHE166 |
| I | SER246 |
| I | ARG307 |
| I | HOH553 |
| I | HOH584 |
| I | HOH641 |
| site_id | CC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL I 403 |
| Chain | Residue |
| I | HIS164 |
| I | SER246 |
| I | ILE247 |
| I | GLN248 |
| I | GOL401 |
| I | HOH535 |
| site_id | CC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL J 401 |
| Chain | Residue |
| J | ASN162 |
| J | HIS164 |
| J | GLN248 |
| J | PRO254 |
| J | THR255 |
| J | VAL256 |
| J | CL403 |
| site_id | DC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL J 402 |
| Chain | Residue |
| J | HIS164 |
| J | PHE166 |
| J | SER246 |
| J | ARG307 |
| J | HOH580 |
| site_id | DC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL J 403 |
| Chain | Residue |
| J | HIS164 |
| J | SER246 |
| J | ILE247 |
| J | GLN248 |
| J | GOL401 |
| J | HOH534 |
| site_id | DC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL K 401 |
| Chain | Residue |
| K | ASN162 |
| K | GLN248 |
| K | PRO254 |
| K | THR255 |
| K | VAL256 |
| K | CL402 |
| K | HOH564 |
| site_id | DC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL K 402 |
| Chain | Residue |
| K | HIS164 |
| K | SER246 |
| K | ILE247 |
| K | GLN248 |
| K | GOL401 |
| K | HOH509 |
| site_id | DC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL L 501 |
| Chain | Residue |
| L | ASN75 |
| L | TRP76 |
| L | TYR143 |
| L | TRP144 |
| L | HOH723 |
| M | ASP181 |
| M | GLN183 |
| M | HOH583 |
| M | HOH654 |
| site_id | DC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL L 502 |
| Chain | Residue |
| L | ASN162 |
| L | HIS164 |
| L | GLN248 |
| L | PRO254 |
| L | THR255 |
| L | VAL256 |
| L | CL504 |
| site_id | DC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL L 503 |
| Chain | Residue |
| G | SER88 |
| L | TRP76 |
| L | TYR81 |
| L | ASP82 |
| L | LYS295 |
| L | HOH651 |
| site_id | DC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL L 504 |
| Chain | Residue |
| L | ASN162 |
| L | HIS164 |
| L | SER246 |
| L | ILE247 |
| L | GOL502 |
| L | HOH614 |
| site_id | DC9 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL M 401 |
| Chain | Residue |
| M | ASN162 |
| M | HIS164 |
| M | SER246 |
| M | GLN248 |
| M | PRO254 |
| M | THR255 |
| M | VAL256 |
| M | CL402 |
| M | HOH664 |
| site_id | EC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL M 402 |
| Chain | Residue |
| M | HIS164 |
| M | SER246 |
| M | ILE247 |
| M | GOL401 |
| M | HOH510 |
| site_id | EC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL N 401 |
| Chain | Residue |
| N | ASN162 |
| N | HIS164 |
| N | GLN248 |
| N | PRO254 |
| N | THR255 |
| N | VAL256 |
| N | CL402 |
| N | HOH539 |
| N | HOH619 |
| site_id | EC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CL N 402 |
| Chain | Residue |
| N | ASN162 |
| N | HIS164 |
| N | SER246 |
| N | ILE247 |
| N | GLN248 |
| N | GOL401 |
| N | HOH529 |
| site_id | EC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL O 401 |
| Chain | Residue |
| O | ASN162 |
| O | GLN248 |
| O | PRO254 |
| O | THR255 |
| O | VAL256 |
| O | CL402 |
| O | HOH513 |
| O | HOH630 |
| site_id | EC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CL O 402 |
| Chain | Residue |
| O | ASN162 |
| O | HIS164 |
| O | SER246 |
| O | ILE247 |
| O | GLN248 |
| O | GOL401 |
| O | HOH506 |
| site_id | EC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL P 401 |
| Chain | Residue |
| P | HIS164 |
| P | GLN248 |
| P | PRO254 |
| P | VAL256 |
| P | CL402 |
| site_id | EC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL P 402 |
| Chain | Residue |
| P | ASN162 |
| P | HIS164 |
| P | SER246 |
| P | ILE247 |
| P | GOL401 |
| site_id | EC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL Q 401 |
| Chain | Residue |
| Q | ASN162 |
| Q | GLN248 |
| Q | PRO254 |
| Q | THR255 |
| Q | VAL256 |
| Q | CL402 |
| site_id | EC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL Q 402 |
| Chain | Residue |
| Q | HIS164 |
| Q | SER246 |
| Q | ILE247 |
| Q | GLN248 |
| Q | GOL401 |
| Q | HOH524 |
| site_id | FC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL R 401 |
| Chain | Residue |
| R | ASN162 |
| R | HIS164 |
| R | GLN248 |
| R | PRO254 |
| R | VAL256 |
| R | CL402 |
| site_id | FC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL R 402 |
| Chain | Residue |
| R | HIS164 |
| R | SER246 |
| R | ILE247 |
| R | GLN248 |
| R | GOL401 |
| R | HOH536 |
| site_id | FC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL S 401 |
| Chain | Residue |
| S | LYS147 |
| S | ARG148 |
| S | ASP151 |
| S | HOH515 |
| S | HOH587 |
| site_id | FC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL S 402 |
| Chain | Residue |
| D | TYR81 |
| D | ASP82 |
| S | LYS86 |
| S | GLY87 |
| S | SER88 |
| S | HOH630 |
| site_id | FC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL S 403 |
| Chain | Residue |
| S | HIS164 |
| S | SER246 |
| S | ILE247 |
| S | GLN248 |
| S | HOH521 |
| site_id | FC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL T 401 |
| Chain | Residue |
| T | ASN162 |
| T | HIS164 |
| T | GLN248 |
| T | PRO254 |
| T | THR255 |
| T | VAL256 |
| T | CL402 |
| site_id | FC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CL T 402 |
| Chain | Residue |
| T | ASN162 |
| T | HIS164 |
| T | SER246 |
| T | ILE247 |
| T | GLN248 |
| T | GOL401 |
