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4FM1

Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 801
ChainResidue
AASP113
AASN351
AGLU354
ATRP355
ALEU358
ALYS371
AARG504

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MES A 802
ChainResidue
PDC1
TDG1
AASP6
ATYR7

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MN A 803
ChainResidue
AGLU251
AHOH1099
AHOH1100

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MN A 804
ChainResidue
AASP141
AGLU143
AASP315

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YIDTDGLYA
ChainResidueDetails
ATYR538-ALA546

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PDB entries from 2024-09-04

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