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4FFM

PylC in complex with L-lysine-Ne-D-ornithine (cocrystallized with L-lysine-Ne-D-ornithine)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0008652biological_processamino acid biosynthetic process
A0016874molecular_functionligase activity
A0046872molecular_functionmetal ion binding
A0071524biological_processpyrrolysine biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE 0TF A 901
ChainResidue
ALYS10
ASER246
AGLN247
ATHR248
AGLU302
AATP905
AHOH1001
AHOH1143
ALEU11
AGLN12
AGLU72
ASER169
AGLU171
AASP225
AARG243
APRO245

site_idAC2
Number of Residues21
DetailsBINDING SITE FOR RESIDUE ADP A 902
ChainResidue
ALYS104
APRO119
APHE129
ALYS131
AGLU160
AGLU161
ATYR162
AVAL163
AVAL167
AILE189
AGLU227
AILE229
AGLU239
AMG903
AMG904
AHOH1011
AHOH1160
AHOH1192
AHOH1195
AHOH1204
AHOH1226

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 903
ChainResidue
AGLU227
AGLU239
AADP902
AMG904
AHOH1160
AHOH1204

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 904
ChainResidue
AGLU239
AASP241
AADP902
AMG903
AHOH1192
AHOH1226

site_idAC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ATP A 905
ChainResidue
AGLY8
ALYS10
AASP31
ALYS32
APHE48
AASP49
AVAL50
AILE51
AASN71
AGLU72
AASN73
ACYS76
A0TF901
AHOH1031
AHOH1088
AHOH1143

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFL, ECO:0007744|PDB:4FFM, ECO:0007744|PDB:4FFN, ECO:0007744|PDB:4FFO, ECO:0007744|PDB:4FFR
ChainResidueDetails
ALYS10
AASP31
AASP49

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFL
ChainResidueDetails
ALEU11
AGLU72
ASER246
AGLU302

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFL, ECO:0007744|PDB:4FFM, ECO:0007744|PDB:4FFO, ECO:0007744|PDB:4FFP
ChainResidueDetails
ALYS104
ALYS131
AGLU160

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFL, ECO:0007744|PDB:4FFO, ECO:0007744|PDB:4FFP
ChainResidueDetails
ASER138

site_idSWS_FT_FI5
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFN
ChainResidueDetails
ASER169
AASP225
AARG243

site_idSWS_FT_FI6
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:22985965, ECO:0007744|PDB:4FFL, ECO:0007744|PDB:4FFM, ECO:0007744|PDB:4FFN, ECO:0007744|PDB:4FFO, ECO:0007744|PDB:4FFP, ECO:0007744|PDB:4FFR
ChainResidueDetails
AGLU227
AGLU239
AASP241

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PDB entries from 2024-10-30

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