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4FBC

Structure of mutant RIP from barley seeds in complex with AMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0016787molecular_functionhydrolase activity
A0017148biological_processnegative regulation of translation
A0030598molecular_functionrRNA N-glycosylase activity
A0031640biological_processkilling of cells of another organism
A0035821biological_processmodulation of process of another organism
A0050832biological_processdefense response to fungus
A0090729molecular_functiontoxin activity
B0005737cellular_componentcytoplasm
B0016787molecular_functionhydrolase activity
B0017148biological_processnegative regulation of translation
B0030598molecular_functionrRNA N-glycosylase activity
B0031640biological_processkilling of cells of another organism
B0035821biological_processmodulation of process of another organism
B0050832biological_processdefense response to fungus
B0090729molecular_functiontoxin activity
C0005737cellular_componentcytoplasm
C0016787molecular_functionhydrolase activity
C0017148biological_processnegative regulation of translation
C0030598molecular_functionrRNA N-glycosylase activity
C0031640biological_processkilling of cells of another organism
C0035821biological_processmodulation of process of another organism
C0050832biological_processdefense response to fungus
C0090729molecular_functiontoxin activity
D0005737cellular_componentcytoplasm
D0016787molecular_functionhydrolase activity
D0017148biological_processnegative regulation of translation
D0030598molecular_functionrRNA N-glycosylase activity
D0031640biological_processkilling of cells of another organism
D0035821biological_processmodulation of process of another organism
D0050832biological_processdefense response to fungus
D0090729molecular_functiontoxin activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE AMP A 301
ChainResidue
ATYR87
ALEU88
AGLU89
ALEU170
AARG178
AHOH499
AHOH521
AHOH590
AHOH769

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AMP B 301
ChainResidue
BTYR87
BLEU88
BGLU89
BLEU170
BARG178
BHOH481
BHOH490
BHOH567
BHOH810
BHOH847
CARG119

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AMP C 301
ChainResidue
CTYR87
CLEU88
CGLU89
CGLY116
CLEU170
CARG178
CHOH441
CHOH603
CHOH751
CHOH894
CHOH918

site_idAC4
Number of Residues16
DetailsBINDING SITE FOR RESIDUE AMP D 301
ChainResidue
AARG119
DTYR87
DLEU88
DGLY116
DTHR117
DLEU170
DARG178
DHOH452
DHOH500
DHOH513
DHOH526
DHOH546
DHOH549
DHOH596
DHOH721
DHOH776

Functional Information from PROSITE/UniProt
site_idPS00275
Number of Residues17
DetailsSHIGA_RICIN Shiga/ricin ribosomal inactivating toxins active site signature. LlMVnEATRFQtVSgfV
ChainResidueDetails
ALEU170-VAL186

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AGLU175
BGLU175
CGLU175
DGLU175

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: N-acetylalanine => ECO:0000250
ChainResidueDetails
AALA2
BALA2
CALA2
DALA2

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PDB entries from 2024-06-12

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