Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000049 | molecular_function | tRNA binding |
A | 0003723 | molecular_function | RNA binding |
A | 0003735 | molecular_function | structural constituent of ribosome |
A | 0005840 | cellular_component | ribosome |
A | 0006412 | biological_process | translation |
A | 0006417 | biological_process | regulation of translation |
A | 0015934 | cellular_component | large ribosomal subunit |
A | 0019843 | molecular_function | rRNA binding |
A | 0022625 | cellular_component | cytosolic large ribosomal subunit |
A | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MPD A 301 |
Chain | Residue |
A | GLY67 |
A | VAL72 |
A | ASP111 |
A | GLY176 |
A | LYS177 |
A | MPD303 |
A | HOH473 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MPD A 302 |
Chain | Residue |
A | GLU12 |
A | ILE193 |
A | GLU197 |
A | HIS227 |
A | HOH653 |
A | ARG8 |
A | LEU11 |
site_id | AC3 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE MPD A 303 |
Chain | Residue |
A | THR40 |
A | ALA112 |
A | VAL113 |
A | GLY135 |
A | LEU136 |
A | ILE161 |
A | PRO174 |
A | LYS177 |
A | MPD301 |
A | HOH440 |
A | HOH441 |
A | HOH597 |
A | HOH611 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MRD A 304 |
Chain | Residue |
A | LYS2 |
A | ASN148 |
A | GLU151 |
A | GLU155 |
A | GLU162 |
A | HOH528 |
site_id | AC5 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE SO4 A 305 |
Chain | Residue |
A | ARG53 |
A | LYS79 |
A | GLY80 |
A | ILE83 |
A | GLY96 |
A | HOH420 |
A | HOH471 |
A | HOH555 |
A | HOH590 |
A | HOH683 |
A | HOH684 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE SO4 A 306 |
Chain | Residue |
A | GLU197 |
A | LYS200 |
A | THR207 |
A | PHE208 |
A | LEU209 |
A | HIS227 |
A | HOH449 |
A | HOH477 |
A | HOH564 |
A | HOH671 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 307 |
Chain | Residue |
A | PRO65 |
A | HIS66 |
A | GLY67 |
A | GLN71 |
A | LYS184 |
A | HOH406 |
A | HOH696 |
A | HOH704 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 308 |
Chain | Residue |
A | LYS18 |
A | GLY60 |
A | THR61 |
A | HIS199 |
A | HOH491 |
A | HOH634 |
site_id | AC9 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 A 309 |
Chain | Residue |
A | HIS27 |
A | GLN101 |
A | LYS126 |
A | PRO182 |
A | GLU183 |
A | HOH427 |
A | HOH553 |
A | HOH642 |
A | HOH647 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 310 |
Chain | Residue |
A | TYR7 |
A | LYS82 |
A | SER221 |
A | HOH576 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 311 |
Chain | Residue |
A | HIS172 |
A | HOH452 |
A | HOH570 |
A | HOH573 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 312 |
Chain | Residue |
A | LYS2 |
A | HIS3 |
A | GLY4 |
A | TYR7 |
A | MET218 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 313 |
Chain | Residue |
A | HIS44 |
A | TYR213 |
A | THR215 |
A | SER221 |
A | HOH516 |
A | HOH680 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 314 |
Chain | Residue |
A | ARG73 |
A | HOH588 |
A | HOH674 |
A | THR34 |
A | ALA35 |
A | LYS36 |
Functional Information from PROSITE/UniProt
site_id | PS00430 |
Number of Residues | 47 |
Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mpkhgkryrallekvdpnkiytideaahlvkelatakfd............................................................................ETVEVHAK |
Chain | Residue | Details |
A | MET0-LYS46 | |
site_id | PS01199 |
Number of Residues | 20 |
Details | RIBOSOMAL_L1 Ribosomal protein L1 signature. MgaVgskLGriLGPRGlLPN |
Chain | Residue | Details |
A | MET120-ASN139 | |