4EML
Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with bicarbonate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005829 | cellular_component | cytosol |
A | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
A | 0009234 | biological_process | menaquinone biosynthetic process |
A | 0016829 | molecular_function | lyase activity |
A | 0042372 | biological_process | phylloquinone biosynthetic process |
B | 0003824 | molecular_function | catalytic activity |
B | 0005829 | cellular_component | cytosol |
B | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
B | 0009234 | biological_process | menaquinone biosynthetic process |
B | 0016829 | molecular_function | lyase activity |
B | 0042372 | biological_process | phylloquinone biosynthetic process |
C | 0003824 | molecular_function | catalytic activity |
C | 0005829 | cellular_component | cytosol |
C | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
C | 0009234 | biological_process | menaquinone biosynthetic process |
C | 0016829 | molecular_function | lyase activity |
C | 0042372 | biological_process | phylloquinone biosynthetic process |
D | 0003824 | molecular_function | catalytic activity |
D | 0005829 | cellular_component | cytosol |
D | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
D | 0009234 | biological_process | menaquinone biosynthetic process |
D | 0016829 | molecular_function | lyase activity |
D | 0042372 | biological_process | phylloquinone biosynthetic process |
E | 0003824 | molecular_function | catalytic activity |
E | 0005829 | cellular_component | cytosol |
E | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
E | 0009234 | biological_process | menaquinone biosynthetic process |
E | 0016829 | molecular_function | lyase activity |
E | 0042372 | biological_process | phylloquinone biosynthetic process |
F | 0003824 | molecular_function | catalytic activity |
F | 0005829 | cellular_component | cytosol |
F | 0008935 | molecular_function | 1,4-dihydroxy-2-naphthoyl-CoA synthase activity |
F | 0009234 | biological_process | menaquinone biosynthetic process |
F | 0016829 | molecular_function | lyase activity |
F | 0042372 | biological_process | phylloquinone biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE BCT A 301 |
Chain | Residue |
A | GLY122 |
A | GLY123 |
A | GLN144 |
A | THR145 |
A | GLY146 |
A | TRP174 |
A | HOH441 |
A | HOH507 |
site_id | AC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD A 302 |
Chain | Residue |
A | VAL197 |
A | THR61 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL A 303 |
Chain | Residue |
A | ASP198 |
A | ARG199 |
A | LEU200 |
A | GLU201 |
A | GLU202 |
A | HOH411 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL A 304 |
Chain | Residue |
A | LYS169 |
A | GLU172 |
A | HOH518 |
A | HOH554 |
D | ASN192 |
D | HOH477 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE BCT B 301 |
Chain | Residue |
B | GLY122 |
B | GLY123 |
B | GLN144 |
B | THR145 |
B | GLY146 |
B | TRP174 |
B | HOH426 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL B 302 |
Chain | Residue |
B | THR61 |
B | GLY62 |
B | GLU201 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 303 |
Chain | Residue |
B | SER269 |
B | GLN270 |
B | TYR271 |
B | PRO272 |
B | TRP273 |
C | ASN53 |
C | ARG54 |
C | HOH470 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE BCT C 301 |
Chain | Residue |
C | GLY122 |
C | GLY123 |
C | GLN144 |
C | THR145 |
C | GLY146 |
C | TRP174 |
C | HOH429 |
C | HOH441 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL C 302 |
Chain | Residue |
C | PHE152 |
C | ASP153 |
C | SO4303 |
C | HOH407 |
C | HOH429 |
C | HOH460 |
E | TYR248 |
site_id | BC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 C 303 |
Chain | Residue |
C | ASN97 |
C | GOL302 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 304 |
Chain | Residue |
C | THR61 |
C | LEU115 |
C | LEU200 |
C | GLU201 |
C | HOH519 |
site_id | BC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE BCT D 301 |
Chain | Residue |
D | GLY122 |
D | GLY123 |
D | GLN144 |
D | THR145 |
D | GLY146 |
D | TRP174 |
D | HOH415 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL D 302 |
Chain | Residue |
D | THR61 |
D | GLY62 |
D | ALA63 |
D | GLY64 |
D | HOH513 |
site_id | BC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE BCT E 301 |
Chain | Residue |
E | GLY122 |
E | GLY123 |
E | GLN144 |
E | THR145 |
E | GLY146 |
E | TRP174 |
E | HOH441 |
E | HOH506 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD E 302 |
Chain | Residue |
E | THR61 |
E | GLY62 |
E | LEU115 |
E | VAL197 |
E | GLU201 |
E | HOH462 |
site_id | BC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL E 304 |
Chain | Residue |
E | GLN270 |
E | TYR271 |
site_id | BC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE BCT F 301 |
Chain | Residue |
F | GLY122 |
F | GLY123 |
F | GLN144 |
F | THR145 |
F | GLY146 |
F | TRP174 |
F | HOH445 |
F | HOH501 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD F 302 |
Chain | Residue |
F | GLY62 |
F | TYR71 |
F | LEU115 |
F | HOH505 |
F | HOH550 |
F | THR61 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL F 303 |
Chain | Residue |
F | GLN179 |
F | TYR180 |
F | SER181 |
F | HOH557 |
Functional Information from PROSITE/UniProt
site_id | PS00166 |
Number of Residues | 21 |
Details | ENOYL_COA_HYDRATASE Enoyl-CoA hydratase/isomerase signature. IAlVAGyaiGGGhvlhLvCDL |
Chain | Residue | Details |
A | ILE113-LEU133 |