4E5U
The crystal structure of thymidylate kinase from Pseudomonas aeruginosa PAO1 in complex with thymidine monophosphate.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004798 | molecular_function | thymidylate kinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006227 | biological_process | dUDP biosynthetic process |
A | 0006233 | biological_process | dTDP biosynthetic process |
A | 0006235 | biological_process | dTTP biosynthetic process |
A | 0009165 | biological_process | nucleotide biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0046940 | biological_process | nucleoside monophosphate phosphorylation |
B | 0004798 | molecular_function | thymidylate kinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006227 | biological_process | dUDP biosynthetic process |
B | 0006233 | biological_process | dTDP biosynthetic process |
B | 0006235 | biological_process | dTTP biosynthetic process |
B | 0009165 | biological_process | nucleotide biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0046940 | biological_process | nucleoside monophosphate phosphorylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE TMP A 301 |
Chain | Residue |
A | GLU12 |
A | TYR104 |
A | GLN105 |
A | PHE155 |
A | CA302 |
A | HOH401 |
A | HOH412 |
A | HOH480 |
A | HOH484 |
A | HOH499 |
A | GLU39 |
A | PRO40 |
A | ARG50 |
A | MSE70 |
A | ARG74 |
A | ARG96 |
A | ALA100 |
A | THR101 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA A 302 |
Chain | Residue |
A | GLU12 |
A | GLU156 |
A | TMP301 |
A | HOH483 |
A | HOH484 |
A | HOH499 |
site_id | AC3 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE TMP B 301 |
Chain | Residue |
B | GLU12 |
B | GLU39 |
B | PRO40 |
B | ARG50 |
B | MSE70 |
B | ARG74 |
B | ARG96 |
B | PHE97 |
B | ALA100 |
B | THR101 |
B | TYR104 |
B | GLN105 |
B | PHE155 |
B | CA302 |
B | HOH414 |
B | HOH426 |
B | HOH429 |
B | HOH437 |
B | HOH490 |
B | HOH500 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA B 302 |
Chain | Residue |
B | GLU12 |
B | GLU156 |
B | TMP301 |
B | HOH437 |
B | HOH500 |
B | HOH501 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA B 303 |
Chain | Residue |
A | ASN209 |
B | ALA146 |
B | ARG149 |
B | HOH474 |
B | HOH512 |
B | HOH513 |
B | HOH515 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000255 |
Chain | Residue | Details |
A | GLY10 | |
B | GLY10 |