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4E0B

2.17 Angstrom resolution crystal structure of malate dehydrogenase from Vibrio vulnificus CMCP6

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005737cellular_componentcytoplasm
A0006099biological_processtricarboxylic acid cycle
A0006108biological_processmalate metabolic process
A0016491molecular_functionoxidoreductase activity
A0016615molecular_functionmalate dehydrogenase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019752biological_processcarboxylic acid metabolic process
A0030060molecular_functionL-malate dehydrogenase (NAD+) activity
B0003824molecular_functioncatalytic activity
B0005737cellular_componentcytoplasm
B0006099biological_processtricarboxylic acid cycle
B0006108biological_processmalate metabolic process
B0016491molecular_functionoxidoreductase activity
B0016615molecular_functionmalate dehydrogenase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019752biological_processcarboxylic acid metabolic process
B0030060molecular_functionL-malate dehydrogenase (NAD+) activity
C0003824molecular_functioncatalytic activity
C0005737cellular_componentcytoplasm
C0006099biological_processtricarboxylic acid cycle
C0006108biological_processmalate metabolic process
C0016491molecular_functionoxidoreductase activity
C0016615molecular_functionmalate dehydrogenase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0019752biological_processcarboxylic acid metabolic process
C0030060molecular_functionL-malate dehydrogenase (NAD+) activity
D0003824molecular_functioncatalytic activity
D0005737cellular_componentcytoplasm
D0006099biological_processtricarboxylic acid cycle
D0006108biological_processmalate metabolic process
D0016491molecular_functionoxidoreductase activity
D0016615molecular_functionmalate dehydrogenase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0019752biological_processcarboxylic acid metabolic process
D0030060molecular_functionL-malate dehydrogenase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 401
ChainResidue
AVAL151
AGLU155
AARG170
AVAL171
AARG233
ATYR250

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT B 401
ChainResidue
BVAL171
BARG233
BTYR250
BVAL151
BGLU155
BARG170

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT C 401
ChainResidue
CVAL151
CGLU155
CARG170
CVAL171
CARG233
CTYR250

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT D 401
ChainResidue
DVAL151
DGLU155
DARG170
DVAL171
DARG233
DTYR250

Functional Information from PROSITE/UniProt
site_idPS00068
Number of Residues13
DetailsMDH Malate dehydrogenase active site signature. VTTLDviRSetfV
ChainResidueDetails
AVAL146-VAL158

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01516","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues56
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01516","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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