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4E0B

2.17 Angstrom resolution crystal structure of malate dehydrogenase from Vibrio vulnificus CMCP6

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0006099biological_processtricarboxylic acid cycle
A0006108biological_processmalate metabolic process
A0016491molecular_functionoxidoreductase activity
A0016615molecular_functionmalate dehydrogenase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019752biological_processcarboxylic acid metabolic process
A0030060molecular_functionL-malate dehydrogenase (NAD+) activity
B0003824molecular_functioncatalytic activity
B0006099biological_processtricarboxylic acid cycle
B0006108biological_processmalate metabolic process
B0016491molecular_functionoxidoreductase activity
B0016615molecular_functionmalate dehydrogenase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019752biological_processcarboxylic acid metabolic process
B0030060molecular_functionL-malate dehydrogenase (NAD+) activity
C0003824molecular_functioncatalytic activity
C0006099biological_processtricarboxylic acid cycle
C0006108biological_processmalate metabolic process
C0016491molecular_functionoxidoreductase activity
C0016615molecular_functionmalate dehydrogenase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0019752biological_processcarboxylic acid metabolic process
C0030060molecular_functionL-malate dehydrogenase (NAD+) activity
D0003824molecular_functioncatalytic activity
D0006099biological_processtricarboxylic acid cycle
D0006108biological_processmalate metabolic process
D0016491molecular_functionoxidoreductase activity
D0016615molecular_functionmalate dehydrogenase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0019752biological_processcarboxylic acid metabolic process
D0030060molecular_functionL-malate dehydrogenase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 401
ChainResidue
AVAL151
AGLU155
AARG170
AVAL171
AARG233
ATYR250

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT B 401
ChainResidue
BVAL171
BARG233
BTYR250
BVAL151
BGLU155
BARG170

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT C 401
ChainResidue
CVAL151
CGLU155
CARG170
CVAL171
CARG233
CTYR250

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT D 401
ChainResidue
DVAL151
DGLU155
DARG170
DVAL171
DARG233
DTYR250

Functional Information from PROSITE/UniProt
site_idPS00068
Number of Residues13
DetailsMDH Malate dehydrogenase active site signature. VTTLDviRSetfV
ChainResidueDetails
AVAL146-VAL158

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01516
ChainResidueDetails
AHIS177
BHIS177
CHIS177
DHIS177

site_idSWS_FT_FI2
Number of Residues36
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01516
ChainResidueDetails
AGLY7
BGLY7
BASP34
BARG81
BARG87
BASN94
BILE117
BASN119
BARG153
BMSE227
CGLY7
AASP34
CASP34
CARG81
CARG87
CASN94
CILE117
CASN119
CARG153
CMSE227
DGLY7
DASP34
AARG81
DARG81
DARG87
DASN94
DILE117
DASN119
DARG153
DMSE227
AARG87
AASN94
AILE117
AASN119
AARG153
AMSE227

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PDB entries from 2024-07-10

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