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4DXV

Crystal structure of Dihydrodipicolinate synthase from Acinetobacter baumannii complexed with Mg and Cl ions at 1.80 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
A0009085biological_processlysine biosynthetic process
A0009089biological_processlysine biosynthetic process via diaminopimelate
A0016829molecular_functionlyase activity
A0019877biological_processdiaminopimelate biosynthetic process
A0044281biological_processsmall molecule metabolic process
A0046872molecular_functionmetal ion binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
B0009085biological_processlysine biosynthetic process
B0009089biological_processlysine biosynthetic process via diaminopimelate
B0016829molecular_functionlyase activity
B0019877biological_processdiaminopimelate biosynthetic process
B0044281biological_processsmall molecule metabolic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 301
ChainResidue
ALEU101
ALYS161
AHOH499
AHOH681

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
AASP20
ATRP21
ALYS22
AHOH445

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 303
ChainResidue
AASN134
AVAL135
APRO136
ATHR139
AVAL141
ATHR104

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 301
ChainResidue
BLEU101
BLYS161
BHOH450
BHOH478

Functional Information from PROSITE/UniProt
site_idPS00665
Number of Residues18
DetailsDHDPS_1 Dihydrodipicolinate synthase signature 1. SIVavGTTGEAstlsmeE
ChainResidueDetails
ASER38-GLU55

site_idPS00666
Number of Residues31
DetailsDHDPS_2 Dihydrodipicolinate synthase signature 2. YNVPgrTgvdLsndtavrlaeipn.IvGIKDA
ChainResidueDetails
ATYR133-ALA163

226707

PDB entries from 2024-10-30

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