Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0004518 | molecular_function | nuclease activity |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
A | 0006302 | biological_process | double-strand break repair |
A | 0006974 | biological_process | DNA damage response |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 901 |
Chain | Residue |
A | GLU321 |
A | HOH1130 |
A | PHE371 |
A | ARG375 |
A | ASP409 |
A | VAL410 |
A | ASP425 |
A | LYS450 |
A | HOH1006 |
A | HOH1123 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 902 |
Chain | Residue |
A | THR586 |
A | PRO621 |
A | ASN622 |
A | ASN625 |
B | DT7 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 903 |
Chain | Residue |
A | PHE490 |
A | ALA491 |
A | LYS601 |
site_id | AC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 904 |
Chain | Residue |
A | TYR327 |
A | ASP372 |
A | LYS374 |
A | PHE606 |
A | ASN607 |
A | GLN608 |
A | HOH1027 |
A | HOH1033 |
A | HOH1151 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 905 |
Chain | Residue |
A | MET299 |
A | ALA300 |
A | ARG343 |
A | ARG677 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 906 |
Chain | Residue |
A | HIS682 |
A | ARG702 |
A | LYS706 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 907 |
Chain | Residue |
A | SER655 |
A | GLN656 |
A | HOH1087 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 908 |
Chain | Residue |
A | ARG306 |
A | THR308 |
A | GLU309 |
A | HOH1135 |
site_id | AC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 909 |
Chain | Residue |
A | ARG779 |
A | ARG819 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 910 |
Chain | Residue |
A | SER530 |
A | LYS532 |
A | GLN533 |
B | DA10 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE 9MG B 101 |
Chain | Residue |
B | DA10 |
C | DT3 |
C | CA101 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CA C 101 |
Chain | Residue |
B | 9MG101 |
C | HOH201 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RrqAKavnFGivYgiSdygL |
Chain | Residue | Details |
A | ARG702-LEU721 | |