4DU7
Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with substrate mevalonate diphosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004163 | molecular_function | diphosphomevalonate decarboxylase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0006629 | biological_process | lipid metabolic process |
A | 0008299 | biological_process | isoprenoid biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0016829 | molecular_function | lyase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0019287 | biological_process | isopentenyl diphosphate biosynthetic process, mevalonate pathway |
B | 0004163 | molecular_function | diphosphomevalonate decarboxylase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0006629 | biological_process | lipid metabolic process |
B | 0008299 | biological_process | isoprenoid biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0016829 | molecular_function | lyase activity |
B | 0016831 | molecular_function | carboxy-lyase activity |
B | 0019287 | biological_process | isopentenyl diphosphate biosynthetic process, mevalonate pathway |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE DP6 A 401 |
Chain | Residue |
A | ALA14 |
A | SER192 |
A | ARG193 |
A | MET196 |
A | ASP283 |
A | HOH528 |
A | HOH601 |
A | HOH640 |
A | TYR18 |
A | LYS21 |
A | ILE27 |
A | SER107 |
A | SER139 |
A | GLY140 |
A | SER141 |
A | ARG144 |
site_id | AC2 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE DP6 B 401 |
Chain | Residue |
B | ALA14 |
B | TYR18 |
B | LYS21 |
B | SER107 |
B | SER139 |
B | GLY140 |
B | SER141 |
B | ARG144 |
B | SER192 |
B | ARG193 |
B | MET196 |
B | ASP283 |
B | HOH508 |
B | HOH597 |
B | HOH619 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE FMT B 402 |
Chain | Residue |
A | VAL98 |
A | PRO99 |
B | PRO99 |
B | THR100 |
B | HOH556 |