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4DR0

Crystal structure of Bacillus subtilis dimanganese(II) NrdF

Functional Information from GO Data
ChainGOidnamespacecontents
A0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
A0005971cellular_componentribonucleoside-diphosphate reductase complex
A0009263biological_processdeoxyribonucleotide biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0046872molecular_functionmetal ion binding
B0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
B0005971cellular_componentribonucleoside-diphosphate reductase complex
B0009263biological_processdeoxyribonucleotide biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN A 401
ChainResidue
AGLU97
AGLU164
AGLU198
AHIS201

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN A 402
ChainResidue
AASP66
AGLU97
AHIS101
AGLU198

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 403
ChainResidue
ALYS257
AARG261
AHOH556
AHIS254

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN B 401
ChainResidue
BGLU97
BGLU164
BGLU198
BHIS201
BHOH501

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN B 402
ChainResidue
BASP66
BGLU97
BHIS101
BGLU198

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 403
ChainResidue
ALYS143
BGLY48
BLYS49
BASN50
BGLU51
BHOH588
BHOH605

Functional Information from PROSITE/UniProt
site_idPS00368
Number of Residues18
DetailsRIBORED_SMALL Ribonucleotide reductase small subunit signature. MEnaVHAkSYsnIfmtLA
ChainResidueDetails
AMET96-ALA113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10014
ChainResidueDetails
ATYR105
BTYR105

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU10014
ChainResidueDetails
AASP66
AHIS101
BASP66
BHIS101

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU97
AGLU164
AGLU198
AHIS201
BGLU97
BGLU164
BGLU198
BHIS201

222036

PDB entries from 2024-07-03

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