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4DPL

Structure of malonyl-coenzyme A reductase from crenarchaeota in complex with NadP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0004073molecular_functionaspartate-semialdehyde dehydrogenase activity
A0008652biological_processamino acid biosynthetic process
A0009086biological_processmethionine biosynthetic process
A0009088biological_processthreonine biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0046983molecular_functionprotein dimerization activity
A0050661molecular_functionNADP binding
A0051287molecular_functionNAD binding
B0003723molecular_functionRNA binding
B0004073molecular_functionaspartate-semialdehyde dehydrogenase activity
B0008652biological_processamino acid biosynthetic process
B0009086biological_processmethionine biosynthetic process
B0009088biological_processthreonine biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0046983molecular_functionprotein dimerization activity
B0050661molecular_functionNADP binding
B0051287molecular_functionNAD binding
C0003723molecular_functionRNA binding
C0004073molecular_functionaspartate-semialdehyde dehydrogenase activity
C0008652biological_processamino acid biosynthetic process
C0009086biological_processmethionine biosynthetic process
C0009088biological_processthreonine biosynthetic process
C0016491molecular_functionoxidoreductase activity
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0046983molecular_functionprotein dimerization activity
C0050661molecular_functionNADP binding
C0051287molecular_functionNAD binding
D0003723molecular_functionRNA binding
D0004073molecular_functionaspartate-semialdehyde dehydrogenase activity
D0008652biological_processamino acid biosynthetic process
D0009086biological_processmethionine biosynthetic process
D0009088biological_processthreonine biosynthetic process
D0016491molecular_functionoxidoreductase activity
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0046983molecular_functionprotein dimerization activity
D0050661molecular_functionNADP binding
D0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues29
DetailsBINDING SITE FOR RESIDUE NAP A 401
ChainResidue
AGLY14
APRO86
ALEU87
APRO88
AASN109
ASER110
APRO111
ACYS153
ASER183
AGLY184
AGLY186
ATHR16
ATYR187
AASN335
ATHR336
AGLY339
AALA340
AHOH515
AHOH610
AHOH628
AHOH662
AHOH676
AGLY17
ALEU18
AVAL19
ALYS41
AGLY42
ASER43
ATHR72

site_idAC2
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAP B 401
ChainResidue
BGLY14
BTHR16
BGLY17
BLEU18
BVAL19
BGLY40
BLYS41
BGLY42
BSER43
BTHR72
BPRO86
BLEU87
BPRO88
BALA91
BASN109
BPRO111
BCYS153
BSER183
BGLY184
BGLY186
BTYR187
BASN335
BTHR336
BGLY339
BALA340
BHOH549
BHOH557
BHOH577
BHOH624
BHOH710

site_idAC3
Number of Residues32
DetailsBINDING SITE FOR RESIDUE NAP C 401
ChainResidue
CGLY14
CTHR16
CGLY17
CLEU18
CVAL19
CGLY40
CLYS41
CGLY42
CSER43
CTHR72
CPRO86
CLEU87
CPRO88
CASN109
CSER110
CPRO111
CSER183
CGLY184
CGLY186
CTYR187
CASN335
CTHR336
CGLY339
CALA340
CHOH507
CHOH585
CHOH593
CHOH625
CHOH677
CHOH685
CHOH692
CHOH700

site_idAC4
Number of Residues26
DetailsBINDING SITE FOR RESIDUE NAP D 401
ChainResidue
DTHR72
DPRO86
DLEU87
DPRO88
DASN109
DSER110
DPRO111
DSER183
DGLY184
DGLY186
DTYR187
DASN335
DTHR336
DGLY339
DALA340
DHOH507
DHOH568
DHOH650
DGLY14
DTHR16
DGLY17
DLEU18
DVAL19
DLYS41
DGLY42
DSER43

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Acyl-thioester intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues20
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

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PDB entries from 2025-12-10

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