Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DPE

Structure of MMP3 complexed with a platinum-based inhibitor.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004222molecular_functionmetalloendopeptidase activity
A0006508biological_processproteolysis
A0008237molecular_functionmetallopeptidase activity
A0008270molecular_functionzinc ion binding
A0031012cellular_componentextracellular matrix
B0004222molecular_functionmetalloendopeptidase activity
B0006508biological_processproteolysis
B0008237molecular_functionmetallopeptidase activity
B0008270molecular_functionzinc ion binding
B0031012cellular_componentextracellular matrix
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
AHIS201
AHIS205
AHIS211
BTHR255
BHOH483

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 302
ChainResidue
AHIS151
AASP153
AHIS166
AHIS179

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 303
ChainResidue
AASP158
AGLY159
AGLY161
AVAL163
AASP181
AGLU184

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 304
ChainResidue
AASP141
AGLY173
AASN175
AASP177
AHOH402
AHOH411

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 305
ChainResidue
AASP107
AASP182
AGLU184
BHOH410
BHOH411

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PT A 306
ChainResidue
AGLU139
AMET143
AHOH460

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 301
ChainResidue
BHIS201
BHIS205
BHIS211
BNGH313

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 302
ChainResidue
BHIS151
BASP153
BHIS166
BHIS179

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 303
ChainResidue
BASP158
BGLY159
BGLY161
BVAL163
BASP181
BGLU184

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 304
ChainResidue
BASP141
BGLY173
BASN175
BASP177
BHOH408
BHOH416

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 305
ChainResidue
BASP107
BASP182
BGLU184
BHOH422

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PT B 306
ChainResidue
BGLU139
BMET143
BHOH500
BHOH501

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PT B 307
ChainResidue
BHIS224
BCL311
BCL312
BHOH491

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PT B 308
ChainResidue
BHOH494
BHOH495

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PT B 309
ChainResidue
BARG231
BARG233
BHOH401
BHOH456
BHOH490

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PT B 310
ChainResidue
BLYS94
BHOH402
BHOH403
BHOH404

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 311
ChainResidue
BHIS224
BPT307
BCL312
BHOH491

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 312
ChainResidue
BPT307
BCL311
BHOH491

site_idCC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE NGH B 313
ChainResidue
BVAL163
BLEU164
BALA165
BHIS201
BGLU202
BHIS205
BHIS211
BPRO221
BTYR223
BZN301
BHOH426

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VAAHEIGHSL
ChainResidueDetails
AVAL198-LEU207

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU202
BGLU202

site_idSWS_FT_FI2
Number of Residues32
DetailsBINDING:
ChainResidueDetails
AASP107
AGLY173
AASN175
AASP177
AHIS179
AASP181
AASP182
AGLU184
BASP107
BASP141
BHIS151
AASP141
BASP153
BASP158
BGLY159
BGLY161
BVAL163
BHIS166
BGLY173
BASN175
BASP177
BHIS179
AHIS151
BASP181
BASP182
BGLU184
AASP153
AASP158
AGLY159
AGLY161
AVAL163
AHIS166

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:8740360
ChainResidueDetails
AHIS201
AHIS205
AHIS211
BHIS201
BHIS205
BHIS211

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 591
ChainResidueDetails
AHIS201metal ligand
AGLU202proton acceptor, proton donor
AHIS205metal ligand
AHIS211metal ligand

site_idMCSA2
Number of Residues4
DetailsM-CSA 591
ChainResidueDetails
BHIS201metal ligand
BGLU202proton acceptor, proton donor
BHIS205metal ligand
BHIS211metal ligand

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon