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4DGT

Crystal structure of PLP-bound putative aminotransferase from Clostridium difficile 630 crystallized with magnesium formate

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0009058biological_processbiosynthetic process
A0016740molecular_functiontransferase activity
A0016829molecular_functionlyase activity
A0030170molecular_functionpyridoxal phosphate binding
A0046872molecular_functionmetal ion binding
A0047804molecular_functioncysteine-S-conjugate beta-lyase activity
B0003824molecular_functioncatalytic activity
B0009058biological_processbiosynthetic process
B0016740molecular_functiontransferase activity
B0016829molecular_functionlyase activity
B0030170molecular_functionpyridoxal phosphate binding
B0046872molecular_functionmetal ion binding
B0047804molecular_functioncysteine-S-conjugate beta-lyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE PLP A 401
ChainResidue
AGLY95
AHIS203
ALYS235
AHOH566
AHOH712
AHOH862
AHOH879
AHOH916
BTYR62
BHOH603
AVAL96
AILE97
APRO98
ATYR121
ACYS168
AASN172
AASP200
AILE202

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
APRO312
AHOH645
AHOH651
AHOH752
AHOH841
AHOH873

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 403
ChainResidue
ASER218
AHOH691
AHOH699
AHOH775
AHOH823
AHOH824

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 404
ChainResidue
AHOH680
AHOH781
AHOH784
AHOH869
AHOH900

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 405
ChainResidue
AASN145
AASN147
BASN145
BASN147

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 406
ChainResidue
AMET311
APRO312
ALYS313
AHOH620
AHOH759

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 407
ChainResidue
AGLU222
AHOH664
AHOH767
AHOH769
AHOH855
AHOH856

site_idAC8
Number of Residues17
DetailsBINDING SITE FOR RESIDUE PLP B 401
ChainResidue
ATYR62
AASP266
BGLY95
BVAL96
BILE97
BPRO98
BTYR121
BCYS168
BASN172
BASP200
BILE202
BHIS203
BLYS235
BHOH616
BHOH618
BHOH648
BHOH658

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 402
ChainResidue
BPRO312
BHOH629
BHOH801
BHOH869
BHOH876
BHOH880

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 403
ChainResidue
BHOH532
BHOH783
BHOH784
BHOH785
BHOH878
BHOH904

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 404
ChainResidue
BMET311
BPRO312
BLYS313
BHOH745
BHOH827

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 405
ChainResidue
ATHR179
AASP181
BLYS315
BHOH905

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 406
ChainResidue
BHOH646
BHOH711
BHOH763
BHOH764

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 407
ChainResidue
BLYS160
BHIS193
BHOH675
BHOH707
BHOH758
BHOH835
BHOH938

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 408
ChainResidue
BHOH660
BHOH695
BHOH848
BHOH854
BHOH893
BHOH897

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PDB entries from 2025-12-24

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