4DGM
Crystal Structure of maize CK2 in complex with the inhibitor apigenin
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004672 | molecular_function | protein kinase activity |
| A | 0004674 | molecular_function | protein serine/threonine kinase activity |
| A | 0004676 | molecular_function | 3-phosphoinositide-dependent protein kinase activity |
| A | 0004677 | molecular_function | DNA-dependent protein kinase activity |
| A | 0004679 | molecular_function | AMP-activated protein kinase activity |
| A | 0004694 | molecular_function | eukaryotic translation initiation factor 2alpha kinase activity |
| A | 0004711 | molecular_function | ribosomal protein S6 kinase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005829 | cellular_component | cytosol |
| A | 0005956 | cellular_component | protein kinase CK2 complex |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0006468 | biological_process | protein phosphorylation |
| A | 0006974 | biological_process | DNA damage response |
| A | 0035175 | molecular_function | histone H3S10 kinase activity |
| A | 0035402 | molecular_function | histone H3T11 kinase activity |
| A | 0035403 | molecular_function | histone H3T6 kinase activity |
| A | 0035979 | molecular_function | histone H2AXS139 kinase activity |
| A | 0044022 | molecular_function | histone H3S28 kinase activity |
| A | 0044023 | molecular_function | histone H4S1 kinase activity |
| A | 0044024 | molecular_function | histone H2AS1 kinase activity |
| A | 0044025 | molecular_function | histone H2BS14 kinase activity |
| A | 0051726 | biological_process | regulation of cell cycle |
| A | 0072354 | molecular_function | histone H3T3 kinase activity |
| A | 0072371 | molecular_function | histone H2AS121 kinase activity |
| A | 0072518 | molecular_function | Rho-dependent protein serine/threonine kinase activity |
| A | 0106310 | molecular_function | protein serine kinase activity |
| A | 0140823 | molecular_function | histone H2BS36 kinase activity |
| A | 0140855 | molecular_function | histone H3S57 kinase activity |
| A | 0140857 | molecular_function | histone H3T45 kinase activity |
| A | 1990244 | molecular_function | histone H2AT120 kinase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 401 |
| Chain | Residue |
| A | TYR125 |
| A | MET221 |
| A | GLY224 |
| A | MET225 |
| A | GLU230 |
| A | HOH659 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 402 |
| Chain | Residue |
| A | HIS291 |
| A | HIS291 |
| A | HOH553 |
| A | THR129 |
| A | ASP130 |
| A | ASP130 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EDO A 403 |
| Chain | Residue |
| A | VAL11 |
| A | SER212 |
| A | MET215 |
| A | ARG312 |
| A | LEU313 |
| A | THR314 |
| A | HOH516 |
| A | HOH634 |
| A | HOH635 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 404 |
| Chain | Residue |
| A | ALA9 |
| A | TYR12 |
| A | ALA13 |
| A | ASP14 |
| A | GLN325 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE PEG A 405 |
| Chain | Residue |
| A | ARG278 |
| A | ASP302 |
| A | LEU305 |
| A | ARG306 |
| A | TYR307 |
| A | ASP308 |
| A | GLU311 |
| A | HOH592 |
| site_id | AC6 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE AGI A 406 |
| Chain | Residue |
| A | VAL45 |
| A | VAL53 |
| A | ILE66 |
| A | LYS68 |
| A | PHE113 |
| A | VAL116 |
| A | ASN118 |
| A | MET163 |
| A | ILE174 |
| A | ASP175 |
| A | HOH501 |
| A | HOH581 |
Functional Information from PROSITE/UniProt
| site_id | PS00107 |
| Number of Residues | 24 |
| Details | PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGRGKYSEVFeGinvnnnek..........CIIK |
| Chain | Residue | Details |
| A | VAL45-LYS68 |
| site_id | PS00108 |
| Number of Residues | 13 |
| Details | PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. ImHrDVKphNVMI |
| Chain | Residue | Details |
| A | ILE152-ILE164 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | ACT_SITE: Proton acceptor |
| Chain | Residue | Details |
| A | ASP156 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | BINDING: |
| Chain | Residue | Details |
| A | VAL45 | |
| A | LYS68 |
