4D50
Structure of human deoxyhypusine hydroxylase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004497 | molecular_function | monooxygenase activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0005515 | molecular_function | protein binding |
A | 0005829 | cellular_component | cytosol |
A | 0008612 | biological_process | peptidyl-lysine modification to peptidyl-hypusine |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019135 | molecular_function | deoxyhypusine monooxygenase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0004497 | molecular_function | monooxygenase activity |
B | 0005506 | molecular_function | iron ion binding |
B | 0005515 | molecular_function | protein binding |
B | 0005829 | cellular_component | cytosol |
B | 0008612 | biological_process | peptidyl-lysine modification to peptidyl-hypusine |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019135 | molecular_function | deoxyhypusine monooxygenase activity |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FE A 301 |
Chain | Residue |
A | HIS89 |
A | GLU90 |
A | HIS207 |
A | PER303 |
A | HOH2001 |
A | HOH2003 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FE A 302 |
Chain | Residue |
A | PER303 |
A | HOH2002 |
A | HOH2003 |
A | HIS56 |
A | HIS240 |
A | GLU241 |
site_id | AC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE PER A 303 |
Chain | Residue |
A | HIS56 |
A | HIS89 |
A | GLU90 |
A | HIS207 |
A | MET237 |
A | HIS240 |
A | GLU241 |
A | FE301 |
A | FE302 |
A | HOH2003 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GAI A 404 |
Chain | Residue |
A | GLU274 |
A | LEU277 |
A | ASP278 |
A | HOH2227 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GAI A 405 |
Chain | Residue |
A | GLU4 |
A | PRO37 |
A | GLU188 |
B | LEU145 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GAI A 406 |
Chain | Residue |
A | THR233 |
A | GLU234 |
A | HOH2255 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI A 407 |
Chain | Residue |
A | GLY36 |
A | PRO37 |
A | ILE40 |
A | ASP67 |
A | ARG69 |
A | HOH2060 |
site_id | AC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FE B 301 |
Chain | Residue |
B | HIS89 |
B | GLU90 |
B | HIS207 |
B | FE302 |
B | PER303 |
B | HOH2001 |
B | HOH2003 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FE B 302 |
Chain | Residue |
B | HIS56 |
B | HIS240 |
B | GLU241 |
B | FE301 |
B | PER303 |
B | HOH2002 |
B | HOH2003 |
site_id | BC1 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE PER B 303 |
Chain | Residue |
B | HIS56 |
B | MET86 |
B | HIS89 |
B | GLU90 |
B | HIS207 |
B | MET237 |
B | HIS240 |
B | GLU241 |
B | FE301 |
B | FE302 |
B | HOH2003 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI B 404 |
Chain | Residue |
A | LEU145 |
B | GLU4 |
B | GLY36 |
B | PRO37 |
B | GLU188 |
B | HOH2025 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 52 |
Details | Repeat: {"description":"HEAT-like PBS-type 1"} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 52 |
Details | Repeat: {"description":"HEAT-like PBS-type 2"} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 52 |
Details | Repeat: {"description":"HEAT-like PBS-type 3"} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 52 |
Details | Repeat: {"description":"HEAT-like PBS-type 4"} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 52 |
Details | Repeat: {"description":"HEAT-like PBS-type 5"} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 12 |
Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_03101","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"16533814","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25865244","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4D4Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4D50","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |