Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4CQK

Crystal structure of ligand-bound NaD1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006952	biological_process	defense response
B	0006952	biological_process	defense response
C	0006952	biological_process	defense response
D	0006952	biological_process	defense response
E	0006952	biological_process	defense response
F	0006952	biological_process	defense response
G	0006952	biological_process	defense response
H	0006952	biological_process	defense response
I	0006952	biological_process	defense response
J	0006952	biological_process	defense response
K	0006952	biological_process	defense response
L	0006952	biological_process	defense response
M	0006952	biological_process	defense response
N	0006952	biological_process	defense response

Functional Information from PDB Data

site_id	AC1
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PIO B 1048

Chain	Residue
A	PIO1048
B	HOH2065
B	HOH2066
B	HOH2068
B	HOH2069
B	HOH2070
C	LYS36
H	LYS36
H	PIO1048
J	ARG40
J	PIO1048
B	LYS4
B	HIS33
B	SER35
B	LYS36
B	ILE37
B	LEU38
B	ARG40
B	HOH2064

site_id	AC2
Number of Residues	20
Details	BINDING SITE FOR RESIDUE PIO J 1048

Chain	Residue
B	ILE37
B	ARG40
B	PIO1048
B	HOH2064
B	HOH2070
C	LYS36
C	PIO1048
C	HOH2050
C	HOH2058
F	PIO1048
H	LYS36
J	LYS4
J	HIS33
J	SER35
J	LYS36
J	ILE37
J	LEU38
J	ARG40
J	HOH2048
J	HOH2057

site_id	AC3
Number of Residues	17
Details	BINDING SITE FOR RESIDUE PIO C 1048

Chain	Residue
A	ARG40
A	PIO1048
A	HOH2075
A	HOH2079
C	LYS4
C	HIS33
C	SER35
C	LYS36
C	ILE37
C	LEU38
C	ARG40
C	HOH2057
C	HOH2058
D	PIO1048
G	LYS36
J	LYS36
J	PIO1048

site_id	AC4
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PIO G 1048

Chain	Residue
A	LYS36
A	PIO1048
A	HOH2060
A	HOH2074
D	ARG40
D	PIO1048
D	HOH2062
D	HOH2069
E	PIO1048
G	LYS4
G	HIS33
G	SER35
G	LYS36
G	ILE37
G	LEU38
G	ARG40
G	HOH2059
G	HOH2060
N	LYS36

site_id	AC5
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PIO F 1048

Chain	Residue
B	LYS36
B	ILE37
F	LYS4
F	HIS33
F	SER35
F	LYS36
F	ILE37
F	LEU38
F	ARG40
F	HOH2053
F	HOH2059
F	HOH2062
F	HOH2063
F	HOH2064
H	ARG40
H	PIO1048
J	PIO1048
K	LYS36
K	PIO1048

site_id	AC6
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PIO D 1048

Chain	Residue
D	LYS36
D	ILE37
D	LEU38
D	ARG40
D	HOH2053
D	HOH2063
D	HOH2064
D	HOH2065
D	HOH2066
D	HOH2069
G	ARG40
G	PIO1048
N	LYS36
N	PIO1048
A	LYS36
C	PIO1048
D	LYS4
D	HIS33
D	SER35

site_id	AC7
Number of Residues	21
Details	BINDING SITE FOR RESIDUE PIO H 1048

Chain	Residue
B	LYS36
B	PIO1048
B	HOH2067
B	HOH2068
F	ILE37
F	ARG40
F	PIO1048
F	HOH2059
F	HOH2061
F	HOH2064
H	LYS4
H	HIS33
H	SER35
H	LYS36
H	ILE37
H	LEU38
H	ARG40
H	HOH2053
H	HOH2054
I	PIO1048
K	LYS36

site_id	AC8
Number of Residues	20
Details	BINDING SITE FOR RESIDUE PIO N 1048

Chain	Residue
B	ILE15
B	LEU38
C	ARG39
D	LYS36
D	PIO1048
D	HOH2063
D	HOH2067
D	HOH2068
E	ARG40
E	PIO1048
E	HOH2006
E	HOH2053
N	LYS4
N	HIS33
N	SER35
N	LYS36
N	ILE37
N	LEU38
N	HOH2040
N	HOH2041

site_id	AC9
Number of Residues	15
Details	BINDING SITE FOR RESIDUE PIO E 1048

Chain	Residue
B	ILE37
D	LYS36
E	LYS4
E	HIS33
E	SER35
E	LYS36
E	ILE37
E	LEU38
E	ARG40
E	HOH2006
E	HOH2051
E	HOH2052
G	PIO1048
N	ILE37
N	PIO1048

site_id	BC1
Number of Residues	21
Details	BINDING SITE FOR RESIDUE PIO L 1048

Chain	Residue
A	GLY12
A	ILE13
A	HOH2016
I	LYS36
I	PIO1048
I	HOH2065
I	HOH2068
L	LYS4
L	HIS33
L	SER35
L	LYS36
L	ILE37
L	LEU38
L	ARG40
L	HOH2048
L	HOH2049
L	HOH2050
L	HOH2051
M	LYS36
M	ARG40
M	PIO1048

site_id	BC2
Number of Residues	18
Details	BINDING SITE FOR RESIDUE PIO I 1048

Chain	Residue
H	PIO1048
I	LYS4
I	HIS33
I	SER35
I	LYS36
I	ILE37
I	LEU38
I	ARG40
I	HOH2014
I	HOH2065
I	HOH2066
I	HOH2067
I	HOH2068
I	HOH2069
K	ARG40
K	PIO1048
L	LYS36
L	PIO1048

site_id	BC3
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PIO K 1048

Chain	Residue
F	LYS36
F	PIO1048
F	HOH2053
F	HOH2062
I	ARG40
I	PIO1048
I	HOH2064
I	HOH2066
I	HOH2069
K	LYS4
K	HIS33
K	SER35
K	LYS36
K	ILE37
K	LEU38
K	ARG40
K	HOH2039
K	HOH2040
M	PIO1048

site_id	BC4
Number of Residues	14
Details	BINDING SITE FOR RESIDUE PIO M 1048

Chain	Residue
I	LYS36
K	PIO1048
L	ARG40
L	PIO1048
L	HOH2048
M	LYS4
M	HIS33
M	SER35
M	LYS36
M	ILE37
M	LEU38
M	ARG40
M	HOH2029
M	HOH2030

site_id	BC5
Number of Residues	20
Details	BINDING SITE FOR RESIDUE PIO A 1048

Chain	Residue
A	LYS4
A	HIS33
A	SER35
A	LYS36
A	ILE37
A	LEU38
A	ARG40
A	HOH2056
A	HOH2074
A	HOH2075
A	HOH2076
A	HOH2077
A	HOH2079
B	PIO1048
C	ILE37
C	ARG40
C	PIO1048
G	LYS36
G	PIO1048
J	LYS36

site_id	BC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 D 1049

Chain	Residue
D	ARG1
D	CYS47
D	HOH2001
D	HOH2003
D	HOH2061
G	ASN8

site_id	BC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 N 1049

Chain	Residue
G	HOH2024
L	LYS22
N	ARG21
N	HOH2042
N	HOH2043

site_id	BC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE SO4 E 1049

Chain	Residue
E	ARG39
E	HOH2029
E	HOH2046
E	HOH2054
F	GLY12
F	ILE13
F	HOH2029

site_id	BC9
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 C 1049

Chain	Residue
A	ASN8
C	ARG1
C	CYS47
C	HOH2004
C	HOH2056
C	HOH2060
C	HOH2061
C	HOH2062

site_id	CC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 C 1050

Chain	Residue
C	LYS36
C	ILE37

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 N 1050

Chain	Residue
E	ASN8
N	ARG1
N	CYS47
N	HOH2002

site_id	CC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE SO4 G 1049

Chain	Residue
A	LYS22
A	HOH2043
G	ARG1
G	CYS47
G	HOH2003
G	HOH2058
G	HOH2062

site_id	CC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 J 1049

Chain	Residue
B	ASN8
B	HOH2027
C	HOH2041
J	ARG1
J	HOH2002
J	HOH2059

site_id	CC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 A 1049

Chain	Residue
A	ARG1
A	CYS47
A	HOH2003
C	ASN8

site_id	CC6
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 F 1049

Chain	Residue
C	LYS22
F	ARG21
F	ASP31
F	HOH2038
F	HOH2048
F	HOH2065
I	ASN8
K	ARG1

site_id	CC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 I 1049

Chain	Residue
I	ARG1
I	CYS47
I	HOH2003
K	ASN8

site_id	CC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 L 1049

Chain	Residue
L	ARG1
L	CYS47
L	HOH2002
M	ASN8

site_id	CC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 M 1049

Chain	Residue
L	CYS47
L	CYS47
M	LYS45
M	LYS45
M	HOH2027
M	HOH2027

site_id	DC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 A 1050

Chain	Residue
A	ARG21
A	ARG21
A	HOH2045
A	HOH2081
A	HOH2081
A	HOH2082
A	HOH2082
D	ASN8

site_id	DC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 H 1049

Chain	Residue
B	HOH2044
E	ARG1
F	ASN8
H	ARG1
H	CYS47
H	HOH2002

site_id	DC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 M 1050

Chain	Residue
D	LYS28
M	ARG39

site_id	DC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 G 1050

Chain	Residue
C	ASN8
C	HOH2020
C	HOH2021
G	ARG21

site_id	DC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 K 1049

Chain	Residue
K	ARG21
K	HOH2041

site_id	DC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 E 1050

Chain	Residue
D	ARG39
E	LEU38

site_id	DC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 L 1050

Chain	Residue
K	HOH2012
L	ARG21
L	HOH2052
N	ILE25
N	HOH2029

site_id	DC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MRD E 1051

Chain	Residue
E	ARG21
E	HOH2055
H	ARG21
H	HOH2012
J	HOH2018

site_id	DC9
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MRD E 1052

Chain	Residue
B	ARG1
B	HOH2002
B	HOH2003
E	THR30
E	HOH2037
E	HOH2043
H	ARG21
J	ASN8

site_id	EC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MRD A 1051

Chain	Residue
A	LYS28
A	LYS45
A	HOH2071
A	HOH2072
C	LYS45
C	HOH2055

site_id	EC2
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MRD F 1050

Chain	Residue
B	LYS22
B	HOH2048
F	ARG1
F	HOH2002
F	HOH2003
H	ASN8
K	ARG21
K	THR30

Functional Information from PROSITE/UniProt

site_id	PS00940
Number of Residues	24
Details	GAMMA_THIONIN Gamma-thionins family signature. ReCkteSntFp.GiCitkppCrkaC

Chain	Residue	Details
A	ARG1-CYS24

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)