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4CED

Interrogating HIV integrase for compounds that bind- a SAMPL challenge

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 1210
ChainResidue
BTHR66
BHIS67
BLYS111
BLYS136
BLYS159

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1210
ChainResidue
ATHR66
AHIS67
ALYS111
ALYS159

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1211
ChainResidue
BLYS71
BARG166
BHIS171
BLEU172
BHOH2009
BHOH2055

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1211
ChainResidue
ALYS71
AARG166
AHIS171
ALEU172
AHOH2011
AHOH2072

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1212
ChainResidue
AGLU85
AALA86
APHE100
ALYS103
BARG107

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 1212
ChainResidue
AARG107
BGLU85
BALA86
BPHE100
BLYS103

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 1213
ChainResidue
AHIS185

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 1213
ChainResidue
BHIS185

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 1214
ChainResidue
AGLN164
AHOH2067
BGLY94
BSER123
BTHR124
BTHR125
BHOH2021
BHOH2034
BHOH2069

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 1214
ChainResidue
AGLY94
ASER123
ATHR124
ATHR125
AHOH2031
AHOH2053
AHOH2090
BGLN164
BHOH2051

site_idBC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE 9NS B 1215
ChainResidue
AGLN168
AALA169
AGLU170
AHIS171
ATHR174
AMET178
BGLN95
BGLU96
BTYR99
BTHR125
BHOH2019

site_idBC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE 9NS B 1216
ChainResidue
AGLN95
AGLU96
ATYR99
ATHR125
AALA129
AHOH2029
BGLN168
BALA169
BGLU170
BHIS171
BTHR174
BMET178

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AASP64
AASP116
BASP64
BASP116

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P04585
ChainResidueDetails
AGLU152
BGLU152

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PDB entries from 2024-07-24

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