Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4C8O

Binary complex of the large fragment of DNA polymerase I from Thermus Aquaticus with the aritificial base pair dNaM-d5SICS at the postinsertion site (sequence context 2)

Functional Information from GO Data
ChainGOidnamespacecontents
A0001882molecular_functionnucleoside binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 A 1833
ChainResidue
AARG313

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1834
ChainResidue
AGLN613
AHIS639
ALYS663
APHE667
AHOH2150
AHOH2171

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1835
ChainResidue
AHOH3003
AHOH3004
AHOH3005
AHOH3006
AHOH3001
AHOH3002

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 1836
ChainResidue
ALYS314

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1837
ChainResidue
AVAL310
ALEU311
AARG405

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1838
ChainResidue
AHOH3003
BDC103
BHOH2002

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1839
ChainResidue
ASER674
AALA675
AHIS676
ATYR686

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 1840
ChainResidue
AARG431
AARG435

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1841
ChainResidue
AARG393
AARG419
AHOH2038

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE TRS C 1216
ChainResidue
BDC106
CDC209
CDC210

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
ChainResidueDetails
AARG659-LEU678

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon