4BSZ
Crystal Structure of the Yeast Ribosomal Protein Rps3 in Complex with its Chaperone Yar1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000054 | biological_process | ribosomal subunit export from nucleus |
| A | 0000056 | biological_process | ribosomal small subunit export from nucleus |
| A | 0002181 | biological_process | cytoplasmic translation |
| A | 0003723 | molecular_function | RNA binding |
| A | 0003735 | molecular_function | structural constituent of ribosome |
| A | 0003906 | molecular_function | DNA-(apurinic or apyrimidinic site) endonuclease activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0005840 | cellular_component | ribosome |
| A | 0006412 | biological_process | translation |
| A | 0015935 | cellular_component | small ribosomal subunit |
| A | 0022626 | cellular_component | cytosolic ribosome |
| A | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| A | 0030686 | cellular_component | 90S preribosome |
| A | 0030688 | cellular_component | preribosome, small subunit precursor |
| A | 0070651 | biological_process | nonfunctional rRNA decay |
| A | 1990145 | biological_process | maintenance of translational fidelity |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0000056 | biological_process | ribosomal small subunit export from nucleus |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006970 | biological_process | response to osmotic stress |
| B | 0030907 | cellular_component | MBF transcription complex |
| B | 0032880 | biological_process | regulation of protein localization |
| B | 0033309 | cellular_component | SBF transcription complex |
| B | 0034599 | biological_process | cellular response to oxidative stress |
| B | 0042274 | biological_process | ribosomal small subunit biogenesis |
| B | 0051082 | molecular_function | unfolded protein binding |
Functional Information from PROSITE/UniProt
| site_id | PS00548 |
| Number of Residues | 37 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. AKamkfadGfLihSgqpVndfIDtatrhvlMrqGvlG |
| Chain | Residue | Details |
| A | ALA147-GLY183 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17330950 |
| Chain | Residue | Details |
| B | SER78 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:17287358 |
| Chain | Residue | Details |
| A | THR70 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956 |
| Chain | Residue | Details |
| A | SER97 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358 |
| Chain | Residue | Details |
| A | SER129 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | MOD_RES: Omega-N-methylarginine; by SFM1 => ECO:0000269|PubMed:22650761 |
| Chain | Residue | Details |
| A | ARG146 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198 |
| Chain | Residue | Details |
| A | SER221 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:19779198 |
| Chain | Residue | Details |
| A | THR231 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 5 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047 |
| Chain | Residue | Details |
| A | LYS106 | |
| A | LYS132 | |
| A | LYS141 | |
| A | LYS151 | |
| A | LYS200 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:28757607, ECO:0000269|PubMed:30718516, ECO:0000269|PubMed:30893611, ECO:0000269|PubMed:31819057, ECO:0007744|PubMed:22106047 |
| Chain | Residue | Details |
| A | LYS212 |
