4BQ2
Structural analysis of an exo-beta-agarase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004565 | molecular_function | beta-galactosidase activity |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0009341 | cellular_component | beta-galactosidase complex |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0033916 | molecular_function | beta-agarase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004565 | molecular_function | beta-galactosidase activity |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0009341 | cellular_component | beta-galactosidase complex |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0033916 | molecular_function | beta-agarase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004565 | molecular_function | beta-galactosidase activity |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0009341 | cellular_component | beta-galactosidase complex |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0033916 | molecular_function | beta-agarase activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004565 | molecular_function | beta-galactosidase activity |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0009341 | cellular_component | beta-galactosidase complex |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0033916 | molecular_function | beta-agarase activity |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL B 1791 |
| Chain | Residue |
| B | ILE331 |
| B | HOH2654 |
| B | ARG333 |
| B | ASN336 |
| B | ASP362 |
| B | SER363 |
| B | TRP461 |
| B | TRP479 |
| B | ARG752 |
| B | GOL1792 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE GOL B 1792 |
| Chain | Residue |
| B | TRP494 |
| B | GLU534 |
| B | TYR672 |
| B | GLU695 |
| B | HIS697 |
| B | LEU710 |
| B | PHE742 |
| B | ARG752 |
| B | GLU757 |
| B | TYR759 |
| B | GOL1791 |
| B | HOH2480 |
| B | HOH2482 |
| B | HOH2654 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL C 1793 |
| Chain | Residue |
| C | TRP494 |
| C | GLU534 |
| C | TYR672 |
| C | GLU695 |
| C | HIS697 |
| C | PHE742 |
| C | ARG752 |
| C | GLU757 |
| C | HOH2497 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL C 1794 |
| Chain | Residue |
| C | ARG333 |
| C | ASN336 |
| C | ASP362 |
| C | SER363 |
| C | TRP461 |
| C | TRP479 |
| C | PHE742 |
| C | ARG752 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL C 1795 |
| Chain | Residue |
| A | GLN91 |
| A | HIS92 |
| A | SER93 |
| A | TYR94 |
| A | GLN679 |
| A | HOH2023 |
| C | ARG66 |
| C | HOH2028 |
| C | HOH2029 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL D 1792 |
| Chain | Residue |
| D | SER112 |
| D | HIS162 |
| D | PRO236 |
| D | PRO237 |
| D | GLN238 |
| D | HOH2099 |
| D | HOH2173 |
| site_id | AC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 1791 |
| Chain | Residue |
| A | LYS300 |
| A | ALA301 |
| A | HOH2297 |
| C | PRO285 |
| C | SER286 |
| C | HOH2289 |
| C | HOH2291 |
| C | HOH2292 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL D 1793 |
| Chain | Residue |
| B | LYS300 |
| B | ALA301 |
| B | HOH2294 |
| B | HOH2295 |
| D | PRO285 |
| D | SER286 |
| D | HOH2267 |
| site_id | AC9 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL A 1792 |
| Chain | Residue |
| A | GLN252 |
| A | ASN253 |
| A | TYR258 |
| A | HIS703 |
| A | ASP746 |
| A | ASP765 |
| A | VAL766 |
| A | HOH2599 |
| A | HOH2625 |
| site_id | BC1 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL B 1793 |
| Chain | Residue |
| B | GLN252 |
| B | ASN253 |
| B | TYR258 |
| B | HIS703 |
| B | GLY704 |
| B | ASP746 |
| B | ASP765 |
| B | VAL766 |
| B | HOH2609 |
| B | HOH2611 |
| B | HOH2634 |
| site_id | BC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 1794 |
| Chain | Residue |
| D | HOH2033 |
| B | GLN91 |
| B | HIS92 |
| B | SER93 |
| B | GLN679 |
| B | HOH2018 |
| D | ARG66 |
| D | HOH2032 |
| site_id | BC3 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL C 1796 |
| Chain | Residue |
| C | HIS703 |
| C | GLY704 |
| C | SER705 |
| C | ASP746 |
| C | ASP765 |
| C | VAL766 |
| C | HOH2239 |
| C | HOH2604 |
| C | HOH2607 |
| C | HOH2630 |
| site_id | BC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 1793 |
| Chain | Residue |
| A | ARG333 |
| A | ASN336 |
| A | ASP362 |
| A | SER363 |
| A | TRP461 |
| A | PHE742 |
| A | ARG752 |
| A | GOL1795 |
| site_id | BC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 1794 |
| Chain | Residue |
| A | HIS630 |
| A | LYS662 |
| A | TYR663 |
| A | ALA664 |
| A | ASP665 |
| A | LYS689 |
| site_id | BC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL D 1794 |
| Chain | Residue |
| D | ARG333 |
| D | ASN336 |
| D | ASP362 |
| D | ASN533 |
| D | ARG752 |
| D | HOH2442 |
| site_id | BC7 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL A 1795 |
| Chain | Residue |
| A | TRP494 |
| A | GLU534 |
| A | TYR672 |
| A | GLU695 |
| A | HIS697 |
| A | PHE742 |
| A | ARG752 |
| A | GLU757 |
| A | TYR759 |
| A | GOL1793 |
| A | HOH2489 |
| site_id | BC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE GOL B 1795 |
| Chain | Residue |
| B | ARG539 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 1796 |
| Chain | Residue |
| A | LYS364 |
| A | GLY365 |
| A | HOH2351 |
| A | HOH2645 |
| site_id | CC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL B 1796 |
| Chain | Residue |
| B | LEU279 |
| B | GLU444 |
| B | ASP448 |
| B | ARG471 |
| site_id | CC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL C 1797 |
| Chain | Residue |
| C | SER112 |
| C | HIS162 |
| C | ASN235 |
| C | PRO236 |
| C | PRO237 |
| C | GLN238 |
| C | HOH2081 |
| C | HOH2211 |
| site_id | CC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 1797 |
| Chain | Residue |
| B | ASN59 |
| B | PRO101 |
| B | GLU102 |
| D | SER542 |
| D | ASP543 |
| D | HOH2459 |
| site_id | CC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL B 1798 |
| Chain | Residue |
| B | THR359 |
| B | LYS364 |
| B | GLY365 |
| B | HOH2655 |
| site_id | CC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA D 1795 |
| Chain | Residue |
| D | ASP50 |
| D | GLU52 |
| D | SER80 |
| D | LYS81 |
| D | ASP228 |
| D | HOH2006 |
| site_id | CC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA A 1797 |
| Chain | Residue |
| A | ASP50 |
| A | GLU52 |
| A | SER80 |
| A | LYS81 |
| A | ASP228 |
| A | HOH2007 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA B 1799 |
| Chain | Residue |
| B | ASP50 |
| B | GLU52 |
| B | LYS81 |
| B | ASP228 |
| site_id | CC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA C 1798 |
| Chain | Residue |
| C | ASP50 |
| C | GLU52 |
| C | SER80 |
| C | LYS81 |
| C | ASP228 |
| C | HOH2006 |
