4BOL
Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008745 | molecular_function | N-acetylmuramoyl-L-alanine amidase activity |
| A | 0009253 | biological_process | peptidoglycan catabolic process |
| A | 0009254 | biological_process | peptidoglycan turnover |
| A | 0009276 | cellular_component | Gram-negative-bacterium-type cell wall |
| A | 0019867 | cellular_component | outer membrane |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0008745 | molecular_function | N-acetylmuramoyl-L-alanine amidase activity |
| B | 0009253 | biological_process | peptidoglycan catabolic process |
| B | 0009254 | biological_process | peptidoglycan turnover |
| B | 0009276 | cellular_component | Gram-negative-bacterium-type cell wall |
| B | 0019867 | cellular_component | outer membrane |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 1260 |
| Chain | Residue |
| B | HIS42 |
| B | HIS153 |
| B | ASP163 |
| B | HOH2021 |
| site_id | AC2 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE J0J A 1260 |
| Chain | Residue |
| A | GLY88 |
| A | TRP97 |
| A | ASN99 |
| A | GLU106 |
| A | HIS153 |
| A | ARG160 |
| A | PRO184 |
| A | HOH2025 |
| A | HOH2046 |
| A | HOH2080 |
| A | HOH2081 |
| A | HOH2082 |
| A | HOH2083 |
| A | HOH2087 |
| A | HOH2239 |
| A | HOH2240 |
| B | ARG95 |
| A | VAL60 |
| A | ARG83 |
| A | TRP85 |
| A | HIS86 |
| A | ALA87 |
| site_id | AC3 |
| Number of Residues | 23 |
| Details | BINDING SITE FOR RESIDUE J0J B 1261 |
| Chain | Residue |
| A | ARG95 |
| A | HOH2008 |
| A | HOH2019 |
| A | HOH2105 |
| B | VAL60 |
| B | ARG83 |
| B | TRP85 |
| B | HIS86 |
| B | ALA87 |
| B | GLY88 |
| B | TRP97 |
| B | ASN99 |
| B | GLU106 |
| B | HIS153 |
| B | ARG160 |
| B | LYS161 |
| B | HOH2021 |
| B | HOH2063 |
| B | HOH2064 |
| B | HOH2068 |
| B | HOH2222 |
| B | HOH2223 |
| B | HOH2224 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 1261 |
| Chain | Residue |
| A | HIS42 |
| A | HIS153 |
| A | ASP163 |
| A | HOH2025 |
