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4BC2

Crystal structure of human D-xylulokinase in complex with D-xylulose and adenosine diphosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004856molecular_functionD-xylulokinase activity
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0005997biological_processxylulose metabolic process
A0005998biological_processxylulose catabolic process
A0006091biological_processgeneration of precursor metabolites and energy
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0019640biological_processD-glucuronate catabolic process to D-xylulose 5-phosphate
A0042732biological_processD-xylose metabolic process
A0046835biological_processcarbohydrate phosphorylation
B0000166molecular_functionnucleotide binding
B0004856molecular_functionD-xylulokinase activity
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0005997biological_processxylulose metabolic process
B0005998biological_processxylulose catabolic process
B0006091biological_processgeneration of precursor metabolites and energy
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0019640biological_processD-glucuronate catabolic process to D-xylulose 5-phosphate
B0042732biological_processD-xylose metabolic process
B0046835biological_processcarbohydrate phosphorylation
C0000166molecular_functionnucleotide binding
C0004856molecular_functionD-xylulokinase activity
C0005524molecular_functionATP binding
C0005829cellular_componentcytosol
C0005975biological_processcarbohydrate metabolic process
C0005997biological_processxylulose metabolic process
C0005998biological_processxylulose catabolic process
C0006091biological_processgeneration of precursor metabolites and energy
C0016301molecular_functionkinase activity
C0016740molecular_functiontransferase activity
C0019640biological_processD-glucuronate catabolic process to D-xylulose 5-phosphate
C0042732biological_processD-xylose metabolic process
C0046835biological_processcarbohydrate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ADP B 1533
ChainResidue
BSER340
BTRP355
BGLY441
BALA442
BASN445
BHOH2178
BHOH2180
BHOH2284

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ADP A 1533
ChainResidue
AGLY441
AASN445
AHOH2183
AHOH2184
AHOH2237
ATRP355

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE ADP C 1533
ChainResidue
AHOH2040
CLEU299
CSER340
CGLU344
CTRP355
CGLY441
CALA442
CASN445
CHOH2138
CHOH2151

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE XUL B 1534
ChainResidue
BGLN97
BGLN98
BHIS99
BTRP137
BARG170
BASP280
BASN281
BHOH2015

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE XUL C 1534
ChainResidue
CGLN97
CGLN98
CHIS99
CTRP137
CARG170
CASP280
CASN281
CHOH2011

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE XUL A 1534
ChainResidue
AGLN97
AGLN98
AHIS99
ATRP137
AARG170
AASP280
AASN281
AHOH2009

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 1535
ChainResidue
BSER251
BCYS252
BPRO324
BVAL325
BASP326
BSER327

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues21
DetailsBinding site: {}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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