4B5T
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with ketobutyrate
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0010124 | biological_process | phenylacetate catabolic process |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016832 | molecular_function | aldehyde-lyase activity |
| A | 0043863 | molecular_function | 4-hydroxy-2-ketopimelate aldolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0061677 | molecular_function | 2-dehydro-3-deoxy-D-gluconate aldolase activity |
| A | 1901023 | biological_process | 4-hydroxyphenylacetate catabolic process |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0010124 | biological_process | phenylacetate catabolic process |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016832 | molecular_function | aldehyde-lyase activity |
| B | 0043863 | molecular_function | 4-hydroxy-2-ketopimelate aldolase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0061677 | molecular_function | 2-dehydro-3-deoxy-D-gluconate aldolase activity |
| B | 1901023 | biological_process | 4-hydroxyphenylacetate catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CO A 1000 |
| Chain | Residue |
| A | GLN147 |
| A | GLU149 |
| A | ASP175 |
| A | HOH2117 |
| A | HOH2121 |
| A | 2KT4000 |
| site_id | AC2 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL A 1001 |
| Chain | Residue |
| A | GOL1002 |
| A | HOH2076 |
| A | HOH2079 |
| B | LEU22 |
| B | SER23 |
| B | GLN51 |
| B | LEU54 |
| B | HOH2119 |
| A | SER24 |
| A | SER25 |
| A | TYR26 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL A 1002 |
| Chain | Residue |
| A | SER23 |
| A | LEU54 |
| A | GOL1001 |
| A | HOH2136 |
| A | HOH2150 |
| A | HOH2601 |
| B | SER24 |
| B | SER25 |
| B | HOH2066 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 1003 |
| Chain | Residue |
| A | GLN147 |
| A | GLU149 |
| A | ASP175 |
| A | HOH2117 |
| A | HOH2121 |
| A | 2KT4000 |
| site_id | AC5 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE 2KT A 4000 |
| Chain | Residue |
| A | TRP19 |
| A | ARG70 |
| A | GLN147 |
| A | GLU149 |
| A | PHE170 |
| A | GLY172 |
| A | PRO173 |
| A | ALA174 |
| A | ASP175 |
| A | LEU212 |
| A | CO1000 |
| A | MG1003 |
| A | HOH2121 |
| A | HOH2167 |
| A | HOH2424 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CO B 1000 |
| Chain | Residue |
| B | GLN147 |
| B | GLU149 |
| B | ASP175 |
| B | HOH2098 |
| B | HOH2105 |
| B | 2KT4000 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 1001 |
| Chain | Residue |
| B | GLN147 |
| B | GLU149 |
| B | ASP175 |
| B | HOH2098 |
| B | HOH2105 |
| B | 2KT4000 |
| site_id | AC8 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL B 1002 |
| Chain | Residue |
| A | GLU204 |
| B | MET154 |
| B | LEU157 |
| B | GLN197 |
| B | GLN201 |
| B | HOH2269 |
| B | HOH2309 |
| B | HOH2501 |
| B | HOH2502 |
| site_id | AC9 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE 2KT B 4000 |
| Chain | Residue |
| B | TRP19 |
| B | ARG70 |
| B | GLN147 |
| B | GLU149 |
| B | PHE170 |
| B | GLY172 |
| B | PRO173 |
| B | ALA174 |
| B | ASP175 |
| B | LEU212 |
| B | CO1000 |
| B | MG1001 |
| B | HOH2105 |
| B | HOH2147 |
| B | HOH2366 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01292","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01292","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Site: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_01292","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Site: {"description":"Increases basicity of active site His","evidences":[{"source":"HAMAP-Rule","id":"MF_01292","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
