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4B13

Plasmodium vivax N-myristoyltransferase with a bound benzofuran inhibitor (compound 25)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0006499biological_processN-terminal protein myristoylation
A0016746molecular_functionacyltransferase activity
A0046872molecular_functionmetal ion binding
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0006499biological_processN-terminal protein myristoylation
B0016746molecular_functionacyltransferase activity
B0046872molecular_functionmetal ion binding
C0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
C0006499biological_processN-terminal protein myristoylation
C0016746molecular_functionacyltransferase activity
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE X25 A 1411
ChainResidue
AVAL96
ATYR315
ALEU317
ASER319
ATYR334
AASN365
ALEU409
ALEU410
AHOH2409
AGLU97
AASP98
APHE103
APHE105
ATYR107
ATHR197
ATYR211
AHIS213

site_idAC2
Number of Residues38
DetailsBINDING SITE FOR RESIDUE NHW A 1412
ChainResidue
ATYR28
ALYS29
APHE30
ATRP31
AASN94
ATYR95
AVAL96
AASN161
APHE162
ALEU163
ACYS164
AVAL165
AARG170
ASER171
ALYS172
AARG173
ALEU174
AALA175
APRO176
ATHR183
AILE186
ATRP192
AGLN193
AALA194
ATYR196
ATHR197
ALEU202
ATYR393
AMG1414
AHOH2003
AHOH2004
AHOH2215
AHOH2221
AHOH2410
AHOH2411
AHOH2413
AHOH2414
AHOH2415

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1413
ChainResidue
ALYS180
ATHR247
ALEU248
AARG358

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1414
ChainResidue
ALEU169
ASER171
ALYS172
AARG173
ALEU174
ANHW1412

site_idAC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE X25 B 1411
ChainResidue
BGLU97
BASP98
BPHE105
BTYR107
BTYR211
BHIS213
BTYR315
BSER319
BTYR334
BASN365
BLEU367
BLEU409
BLEU410
BHOH2319
BHOH2385

site_idAC6
Number of Residues35
DetailsBINDING SITE FOR RESIDUE NHW B 1412
ChainResidue
BPRO176
BTHR183
BTRP192
BALA194
BTHR197
BLEU202
BTYR393
BMG1415
BHOH2004
BHOH2192
BHOH2195
BHOH2386
BHOH2388
BHOH2389
BHOH2390
BHOH2392
BTYR28
BLYS29
BPHE30
BTRP31
BASN94
BTYR95
BVAL96
BVAL160
BASN161
BPHE162
BLEU163
BCYS164
BVAL165
BARG170
BSER171
BLYS172
BARG173
BLEU174
BALA175

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 1413
ChainResidue
AARG210
ALYS373
AHOH2245
BARG210
BLYS373

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1414
ChainResidue
BLYS180
BTHR247
BLEU248
BARG358

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1415
ChainResidue
BLEU169
BSER171
BLYS172
BARG173
BLEU174
BNHW1412

site_idBC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE X25 C 1411
ChainResidue
CVAL96
CGLU97
CASP98
CPHE105
CTYR107
CTHR197
CTYR211
CHIS213
CTYR315
CSER319
CTYR334
CLEU367
CLEU388
CLEU409
CLEU410
CHOH2189

site_idBC2
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NHW C 1412
ChainResidue
CTYR28
CLYS29
CPHE30
CTRP31
CASN94
CTYR95
CVAL96
CASN161
CPHE162
CLEU163
CCYS164
CVAL165
CARG170
CSER171
CLYS172
CARG173
CLEU174
CALA175
CPRO176
CTHR183
CILE186
CTRP192
CALA194
CTYR196
CTHR197
CLEU202
CTYR393
CMG1414
CHOH2001
CHOH2176
CHOH2341
CHOH2343
CHOH2344
CHOH2345

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 1413
ChainResidue
CLYS180
CTHR247
CLEU248
CARG358

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 1414
ChainResidue
CLEU169
CSER171
CLYS172
CARG173
CLEU174
CNHW1412

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EVNFLCvHK
ChainResidueDetails
AGLU159-LYS167

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGeGDG
ChainResidueDetails
ALYS380-GLY386

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PDB entries from 2024-07-24

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