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4B12

Plasmodium vivax N-myristoyltransferase with a bound benzofuran inhibitor (compound 23)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0006499biological_processN-terminal protein myristoylation
A0016746molecular_functionacyltransferase activity
A0046872molecular_functionmetal ion binding
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0006499biological_processN-terminal protein myristoylation
B0016746molecular_functionacyltransferase activity
B0046872molecular_functionmetal ion binding
C0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
C0006499biological_processN-terminal protein myristoylation
C0016746molecular_functionacyltransferase activity
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE C23 A 1411
ChainResidue
AVAL96
ASER319
ATYR334
ALEU367
ALEU388
ALEU409
ALEU410
ADMS1414
AGLU97
AASP98
APHE105
ATYR107
ATHR197
ATYR211
AHIS213
ATYR315

site_idAC2
Number of Residues37
DetailsBINDING SITE FOR RESIDUE NHW A 1412
ChainResidue
ATYR28
ALYS29
APHE30
ATRP31
AASN94
ATYR95
AVAL96
AASN161
APHE162
ALEU163
ACYS164
AVAL165
AARG170
ASER171
ALYS172
AARG173
ALEU174
AALA175
APRO176
ATHR183
AASN187
ATRP192
AGLN193
AALA194
ATHR197
ALEU202
ATYR393
AMG1417
AHOH2003
AHOH2230
AHOH2238
AHOH2434
AHOH2435
AHOH2436
AHOH2437
AHOH2438
AHOH2439

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 1413
ChainResidue
AGLU159
APHE281
ATRP289
AHOH2390

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS A 1414
ChainResidue
APHE226
AALA332
ATYR334
AASN365
AC231411
AHOH2377

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 1415
ChainResidue
AASN295
ATYR298
ASER316
AASN331
AASN359

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 1416
ChainResidue
ALYS180
ATHR247
ALEU248
AARG358
AHOH2063

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1417
ChainResidue
ALEU169
ASER171
ALYS172
AARG173
ALEU174
ANHW1412

site_idAC8
Number of Residues15
DetailsBINDING SITE FOR RESIDUE C23 B 1411
ChainResidue
BVAL96
BGLU97
BASP98
BPHE105
BTYR107
BTYR211
BHIS213
BTYR315
BSER319
BTYR334
BLEU388
BLEU409
BLEU410
BDMS1414
BHOH2322

site_idAC9
Number of Residues38
DetailsBINDING SITE FOR RESIDUE NHW B 1412
ChainResidue
BVAL96
BASN161
BPHE162
BLEU163
BCYS164
BVAL165
BARG170
BSER171
BLYS172
BARG173
BLEU174
BALA175
BPRO176
BTHR183
BILE186
BTRP192
BGLN193
BALA194
BTHR197
BLEU202
BTYR393
BMG1418
BHOH2001
BHOH2003
BHOH2191
BHOH2196
BHOH2197
BHOH2373
BHOH2374
BHOH2375
BHOH2376
BHOH2377
BHOH2378
BTYR28
BLYS29
BPHE30
BTRP31
BTYR95

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 1413
ChainResidue
BILE144
BGLU159
BPHE281
BTRP289
BHOH2334

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DMS B 1414
ChainResidue
BPHE226
BLEU330
BALA332
BTYR334
BASN365
BC231411
BHOH2324

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 1415
ChainResidue
BASN295
BSER316
BASN331
BASN359
BASN360

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 1416
ChainResidue
AARG210
ALYS373
BARG210
BLYS373

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 1417
ChainResidue
BLYS180
BTHR247
BLEU248
BARG358
BHOH2265

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1418
ChainResidue
BLEU169
BSER171
BLYS172
BARG173
BLEU174
BNHW1412

site_idBC7
Number of Residues17
DetailsBINDING SITE FOR RESIDUE C23 C 1411
ChainResidue
CVAL96
CGLU97
CASP98
CPHE103
CPHE105
CTYR107
CTYR211
CHIS213
CTYR315
CSER319
CTYR334
CLEU367
CLEU409
CLEU410
CDMS1414
CHOH2162
CHOH2252

site_idBC8
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NHW C 1412
ChainResidue
CTYR28
CLYS29
CPHE30
CTRP31
CTYR95
CVAL96
CASN161
CPHE162
CLEU163
CCYS164
CVAL165
CARG170
CSER171
CLYS172
CARG173
CLEU174
CALA175
CPRO176
CTHR183
CILE186
CTRP192
CALA194
CTHR197
CLEU202
CTYR393
CMG1416
CHOH2001
CHOH2144
CHOH2150
CHOH2306
CHOH2307
CHOH2308
CHOH2309
CHOH2311

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS C 1413
ChainResidue
CGLU159
CPHE281
CTRP289
CHOH2261

site_idCC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE DMS C 1414
ChainResidue
CHIS213
CPHE226
CLEU330
CALA332
CTYR334
CVAL363
CASN365
CC231411
CHOH2254

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 1415
ChainResidue
CLYS180
CTHR247
CLEU248
CARG358

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 1416
ChainResidue
CLEU169
CSER171
CLYS172
CARG173
CLEU174
CNHW1412

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EVNFLCvHK
ChainResidueDetails
AGLU159-LYS167

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGeGDG
ChainResidueDetails
ALYS380-GLY386

222415

PDB entries from 2024-07-10

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