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4AYQ

Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with mannoimidazole

Functional Information from GO Data
ChainGOidnamespacecontents
A0004559molecular_functionalpha-mannosidase activity
A0004571molecular_functionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
A0005509molecular_functioncalcium ion binding
A0005975biological_processcarbohydrate metabolic process
A0016020cellular_componentmembrane
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0046872molecular_functionmetal ion binding
A1904382biological_processmannose trimming involved in glycoprotein ERAD pathway
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 500
ChainResidue
ATHR451
AMVL503
AHOH2554
AHOH2555
AHOH2722
AHOH2723

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 501
ChainResidue
AHOH2558
AHOH2559
AHOH2658
AGLU253
AHOH2556
AHOH2557

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 502
ChainResidue
AGLU84
AASP87
ASER426
AASN454
AHOH2201

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE MVL A 503
ChainResidue
AARG125
AASP249
ALEU310
AARG363
APRO364
AGLU365
ATYR423
AGLU427
ATHR451
AGLU452
ACA500
AHOH2309
AHOH2550
AHOH2722
AHOH2723

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PEG A 504
ChainResidue
AARG219
ALYS222
AILE223
APEG505
AHOH2600
AHOH2842

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PEG A 505
ChainResidue
AASP218
AARG219
APEG504
APEG508
AHOH2509
AHOH2841
AHOH2842

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG A 506
ChainResidue
ASER197
AARG203
APHE206
APEG507
AHOH2472

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PEG A 507
ChainResidue
AGLY201
AARG203
APEG506
AHOH2121

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PEG A 508
ChainResidue
ASER221
AGLU273
APEG505
AHOH2506
AHOH2847
AHOH2848

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PDB entries from 2024-09-18

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