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4AVL

Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with dTMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0039694biological_processviral RNA genome replication
B0003723molecular_functionRNA binding
B0039694biological_processviral RNA genome replication
C0003723molecular_functionRNA binding
C0039694biological_processviral RNA genome replication
D0003723molecular_functionRNA binding
D0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 1198
ChainResidue
AHIS41
AASP108
AGLU119
AILE120
ATMP1200

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 1199
ChainResidue
AHOH2044
AHOH2063
AGLU80
AASP108
ATMP1200
AHOH2043

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE TMP A 1200
ChainResidue
ATYR24
AGLU26
ALYS34
AILE38
AHIS41
AGLU80
AASP108
AGLU119
AILE120
ALYS134
AMN1198
AMN1199
AHOH2044
AHOH2063
AHOH2070
AHOH2071
AHOH2085

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN B 1197
ChainResidue
BHIS41
BASP108
BGLU119
BILE120
BTMP1199

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 1198
ChainResidue
BGLU80
BASP108
BTMP1199
BHOH2026
BHOH2027
BHOH2032

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE TMP B 1199
ChainResidue
BTYR24
BLYS34
BHIS41
BGLU80
BASP108
BGLU119
BILE120
BLYS134
BMN1197
BMN1198
BHOH2032
BHOH2036

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN C 1197
ChainResidue
CHIS41
CASP108
CGLU119
CILE120
CTMP1199

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN C 1198
ChainResidue
CGLU80
CASP108
CTMP1199
CHOH2023
CHOH2024
CHOH2030

site_idAC9
Number of Residues17
DetailsBINDING SITE FOR RESIDUE TMP C 1199
ChainResidue
CTYR24
CLYS34
CILE38
CHIS41
CGLU80
CASP108
CGLU119
CILE120
CLYS134
CMN1197
CMN1198
CHOH2008
CHOH2024
CHOH2030
CHOH2034
CHOH2035
CHOH2043

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN D 1198
ChainResidue
DHIS41
DASP108
DGLU119
DILE120
DTMP1200

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN D 1199
ChainResidue
DGLU80
DASP108
DTMP1200
DHOH2010
DHOH2028
DHOH2043

site_idBC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE TMP D 1200
ChainResidue
DILE120
DLYS134
DMN1198
DMN1199
DHOH2009
DHOH2010
DHOH2043
DHOH2051
DHOH2053
DHOH2056
DHOH2066
ALYS104
DTYR24
DGLU26
DLYS34
DILE38
DHIS41
DGLU80
DASP108
DGLU119

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PDB entries from 2024-08-21

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