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4AL3

peptide deformylase (Co-form) with mercaptoethanol

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0008198molecular_functionferrous iron binding
A0008270molecular_functionzinc ion binding
A0016787molecular_functionhydrolase activity
A0031365biological_processN-terminal protein amino acid modification
A0042586molecular_functionpeptide deformylase activity
A0043022molecular_functionribosome binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO A 1163
ChainResidue
AGLN50
ACSO90
AHIS132
AHIS136
ABME1165

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 1164
ChainResidue
AHIS132

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE BME A 1165
ChainResidue
AGLN50
ACSO90
ALEU91
AHIS132
AGLU133
AHIS136
ACO1163
AGLY43
AILE44
AGLY45

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"9846875","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9846875","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 98
ChainResidueDetails
AGLY45activator, hydrogen bond acceptor
AGLN50electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
ALEU91metal ligand
AGLU95electrostatic stabiliser, hydrogen bond donor
AHIS136metal ligand
ALEU137hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
ALYS140metal ligand

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PDB entries from 2025-12-17

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