Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4A99

STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETX IN COMPLEX WITH MINOCYCLINE

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0004497	molecular_function	monooxygenase activity
A	0005737	cellular_component	cytoplasm
A	0016491	molecular_function	oxidoreductase activity
A	0046677	biological_process	response to antibiotic
A	0071949	molecular_function	FAD binding
B	0000166	molecular_function	nucleotide binding
B	0004497	molecular_function	monooxygenase activity
B	0005737	cellular_component	cytoplasm
B	0016491	molecular_function	oxidoreductase activity
B	0046677	biological_process	response to antibiotic
B	0071949	molecular_function	FAD binding
C	0000166	molecular_function	nucleotide binding
C	0004497	molecular_function	monooxygenase activity
C	0005737	cellular_component	cytoplasm
C	0016491	molecular_function	oxidoreductase activity
C	0046677	biological_process	response to antibiotic
C	0071949	molecular_function	FAD binding
D	0000166	molecular_function	nucleotide binding
D	0004497	molecular_function	monooxygenase activity
D	0005737	cellular_component	cytoplasm
D	0016491	molecular_function	oxidoreductase activity
D	0046677	biological_process	response to antibiotic
D	0071949	molecular_function	FAD binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	30
Details	BINDING SITE FOR RESIDUE FAD A 389

Chain	Residue
A	GLY23
A	ARG121
A	ARG137
A	LEU139
A	ALA167
A	ASN168
A	GLY169
A	GLY310
A	ASP311
A	PRO318
A	GLY321
A	GLY25
A	GLY323
A	VAL324
A	MIY391
A	HOH2005
A	HOH2033
A	HOH2035
A	HOH2086
A	HOH2112
A	HOH2115
A	HOH2201
A	PRO26
A	HOH2202
A	VAL27
A	TYR45
A	GLU46
A	ARG47
A	LEU60
A	ARG117

site_id	AC2
Number of Residues	16
Details	BINDING SITE FOR RESIDUE MIY A 391

Chain	Residue
A	GLN192
A	ARG213
A	PHE224
A	ALA225
A	ASN226
A	HIS234
A	GLY236
A	PRO318
A	PHE319
A	ALA320
A	GLY321
A	FAD389
A	HOH2032
A	HOH2034
A	HOH2038
A	HOH2128

site_id	AC3
Number of Residues	8
Details	BINDING SITE FOR RESIDUE MIY A 392

Chain	Residue
A	LYS72
A	GLN78
A	TYR81
A	PHE110
C	GLY65
C	GLN322
C	SER326
C	MIY392

site_id	AC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 A 1383

Chain	Residue
A	ARG137
A	LYS156

site_id	AC5
Number of Residues	30
Details	BINDING SITE FOR RESIDUE FAD B 389

Chain	Residue
B	GLY23
B	GLY25
B	PRO26
B	VAL27
B	TYR45
B	GLU46
B	ARG47
B	LEU60
B	ARG117
B	ARG121
B	ARG137
B	LYS138
B	LEU139
B	ALA167
B	ASN168
B	GLY169
B	GLY310
B	ASP311
B	PRO318
B	GLY323
B	VAL324
B	MIY391
B	HOH2006
B	HOH2014
B	HOH2028
B	HOH2105
B	HOH2107
B	HOH2109
B	HOH2174
B	HOH2187

site_id	AC6
Number of Residues	16
Details	BINDING SITE FOR RESIDUE MIY B 391

Chain	Residue
B	HOH2036
B	HOH2122
B	HOH2137
B	GLN192
B	ARG213
B	PHE224
B	ALA225
B	ASN226
B	HIS234
B	GLY236
B	PRO318
B	PHE319
B	ALA320
B	GLY321
B	FAD389
B	HOH2035

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 B 1383

Chain	Residue
B	ALA53
B	ARG54
C	ARG54

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 B 1384

Chain	Residue
B	ARG137
B	LYS156
B	HOH2084

site_id	AC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 B 1385

Chain	Residue
B	ARG47
B	MET171

site_id	BC1
Number of Residues	30
Details	BINDING SITE FOR RESIDUE FAD C 389

Chain	Residue
C	GLY23
C	GLY25
C	PRO26
C	VAL27
C	TYR45
C	GLU46
C	ARG47
C	LEU60
C	ARG117
C	ARG121
C	ARG137
C	LYS138
C	LEU139
C	ALA167
C	ASN168
C	GLY169
C	GLY310
C	ASP311
C	PRO318
C	GLY321
C	GLY323
C	VAL324
C	MIY391
C	HOH2005
C	HOH2014
C	HOH2078
C	HOH2081
C	HOH2129
C	HOH2130
C	HOH2131

site_id	BC2
Number of Residues	16
Details	BINDING SITE FOR RESIDUE MIY C 391

Chain	Residue
C	GLN192
C	ARG213
C	PHE224
C	ALA225
C	ASN226
C	HIS234
C	GLY236
C	PRO318
C	PHE319
C	ALA320
C	GLY321
C	MET375
C	FAD389
C	HOH2028
C	HOH2088
C	HOH2095

site_id	BC3
Number of Residues	11
Details	BINDING SITE FOR RESIDUE MIY C 392

Chain	Residue
A	PRO106
A	GLU107
A	ARG109
A	PHE110
A	MIY392
C	ILE333
C	GLN356
C	ILE359
C	TYR360
C	GLU363
C	HOH2126

site_id	BC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 C 1383

Chain	Residue
B	ARG54
C	ALA53
C	ARG54

site_id	BC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE SO4 C 1384

Chain	Residue
C	ARG137
C	LYS156

site_id	BC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 C 1385

Chain	Residue
C	ARG47
C	LYS138
C	LYS173
C	HOH2133
C	HOH2134

site_id	BC7
Number of Residues	27
Details	BINDING SITE FOR RESIDUE FAD D 389

Chain	Residue
D	GLY23
D	GLY25
D	PRO26
D	VAL27
D	TYR45
D	GLU46
D	ARG47
D	ARG117
D	ARG121
D	ARG137
D	LYS138
D	LEU139
D	ALA167
D	ASN168
D	GLY169
D	GLY310
D	ASP311
D	PRO318
D	GLY321
D	GLY323
D	VAL324
D	MIY391
D	HOH2006
D	HOH2065
D	HOH2068
D	HOH2100
D	HOH2111

site_id	BC8
Number of Residues	16
Details	BINDING SITE FOR RESIDUE MIY D 391

Chain	Residue
D	GLN192
D	ARG213
D	PHE224
D	ALA225
D	ASN226
D	HIS234
D	GLY236
D	PRO318
D	PHE319
D	ALA320
D	GLY321
D	ASN371
D	MET375
D	FAD389
D	HOH2023
D	HOH2075

site_id	BC9
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MIY D 392

Chain	Residue
B	LYS72
B	GLN78
B	TYR81
B	PHE110
D	GLY65
D	SER326
D	MIY393

site_id	CC1
Number of Residues	10
Details	BINDING SITE FOR RESIDUE MIY D 393

Chain	Residue
B	PRO106
B	GLU107
B	ARG109
B	PHE110
D	ILE333
D	GLN356
D	ILE359
D	TYR360
D	GLU363
D	MIY392

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 D 1383

Chain	Residue
A	ARG54
D	ALA53
D	ARG54
D	HOH2112

site_id	CC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 D 1384

Chain	Residue
D	ARG137
D	LYS156
D	HOH2113

site_id	CC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 D 1385

Chain	Residue
D	ARG47
D	MET171
D	HOH2114

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	32
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21402075","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21590745","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XDO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XYO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3P9U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A6N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A99","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GUV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00845","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"21402075","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00845","evidenceCode":"ECO:0000255"},{"source":"PDB","id":"3V3O","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00845","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"21402075","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21590745","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XDO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XYO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3P9U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A6N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A99","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GUV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21402075","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23999299","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2Y6Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A99","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"21402075","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23999299","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2Y6Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3V3O","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A6N","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4A99","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)