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4A8C

Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with a binding peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0004175molecular_functionendopeptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0006508biological_processproteolysis
A0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
A0008233molecular_functionpeptidase activity
A0008236molecular_functionserine-type peptidase activity
A0042597cellular_componentperiplasmic space
A0042802molecular_functionidentical protein binding
A0051603biological_processproteolysis involved in protein catabolic process
B0004175molecular_functionendopeptidase activity
B0004252molecular_functionserine-type endopeptidase activity
B0005515molecular_functionprotein binding
B0006508biological_processproteolysis
B0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
B0008233molecular_functionpeptidase activity
B0008236molecular_functionserine-type peptidase activity
B0042597cellular_componentperiplasmic space
B0042802molecular_functionidentical protein binding
B0051603biological_processproteolysis involved in protein catabolic process
C0004175molecular_functionendopeptidase activity
C0004252molecular_functionserine-type endopeptidase activity
C0005515molecular_functionprotein binding
C0006508biological_processproteolysis
C0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
C0008233molecular_functionpeptidase activity
C0008236molecular_functionserine-type peptidase activity
C0042597cellular_componentperiplasmic space
C0042802molecular_functionidentical protein binding
C0051603biological_processproteolysis involved in protein catabolic process
D0004175molecular_functionendopeptidase activity
D0004252molecular_functionserine-type endopeptidase activity
D0005515molecular_functionprotein binding
D0006508biological_processproteolysis
D0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
D0008233molecular_functionpeptidase activity
D0008236molecular_functionserine-type peptidase activity
D0042597cellular_componentperiplasmic space
D0042802molecular_functionidentical protein binding
D0051603biological_processproteolysis involved in protein catabolic process
E0004175molecular_functionendopeptidase activity
E0004252molecular_functionserine-type endopeptidase activity
E0005515molecular_functionprotein binding
E0006508biological_processproteolysis
E0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
E0008233molecular_functionpeptidase activity
E0008236molecular_functionserine-type peptidase activity
E0042597cellular_componentperiplasmic space
E0042802molecular_functionidentical protein binding
E0051603biological_processproteolysis involved in protein catabolic process
F0004175molecular_functionendopeptidase activity
F0004252molecular_functionserine-type endopeptidase activity
F0005515molecular_functionprotein binding
F0006508biological_processproteolysis
F0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
F0008233molecular_functionpeptidase activity
F0008236molecular_functionserine-type peptidase activity
F0042597cellular_componentperiplasmic space
F0042802molecular_functionidentical protein binding
F0051603biological_processproteolysis involved in protein catabolic process
G0004175molecular_functionendopeptidase activity
G0004252molecular_functionserine-type endopeptidase activity
G0005515molecular_functionprotein binding
G0006508biological_processproteolysis
G0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
G0008233molecular_functionpeptidase activity
G0008236molecular_functionserine-type peptidase activity
G0042597cellular_componentperiplasmic space
G0042802molecular_functionidentical protein binding
G0051603biological_processproteolysis involved in protein catabolic process
H0004175molecular_functionendopeptidase activity
H0004252molecular_functionserine-type endopeptidase activity
H0005515molecular_functionprotein binding
H0006508biological_processproteolysis
H0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
H0008233molecular_functionpeptidase activity
H0008236molecular_functionserine-type peptidase activity
H0042597cellular_componentperiplasmic space
H0042802molecular_functionidentical protein binding
H0051603biological_processproteolysis involved in protein catabolic process
I0004175molecular_functionendopeptidase activity
I0004252molecular_functionserine-type endopeptidase activity
I0005515molecular_functionprotein binding
I0006508biological_processproteolysis
I0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
I0008233molecular_functionpeptidase activity
I0008236molecular_functionserine-type peptidase activity
I0042597cellular_componentperiplasmic space
I0042802molecular_functionidentical protein binding
I0051603biological_processproteolysis involved in protein catabolic process
J0004175molecular_functionendopeptidase activity
J0004252molecular_functionserine-type endopeptidase activity
J0005515molecular_functionprotein binding
J0006508biological_processproteolysis
J0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
J0008233molecular_functionpeptidase activity
J0008236molecular_functionserine-type peptidase activity
J0042597cellular_componentperiplasmic space
J0042802molecular_functionidentical protein binding
J0051603biological_processproteolysis involved in protein catabolic process
K0004175molecular_functionendopeptidase activity
K0004252molecular_functionserine-type endopeptidase activity
K0005515molecular_functionprotein binding
K0006508biological_processproteolysis
K0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
K0008233molecular_functionpeptidase activity
K0008236molecular_functionserine-type peptidase activity
K0042597cellular_componentperiplasmic space
K0042802molecular_functionidentical protein binding
K0051603biological_processproteolysis involved in protein catabolic process
L0004175molecular_functionendopeptidase activity
L0004252molecular_functionserine-type endopeptidase activity
L0005515molecular_functionprotein binding
L0006508biological_processproteolysis
L0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
L0008233molecular_functionpeptidase activity
L0008236molecular_functionserine-type peptidase activity
L0042597cellular_componentperiplasmic space
L0042802molecular_functionidentical protein binding
L0051603biological_processproteolysis involved in protein catabolic process
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsACT_SITE: Charge relay system => ECO:0000269|PubMed:21685389
ChainResidueDetails
AHIS82
DHIS82
DASP112
DALA187
EHIS82
EASP112
EALA187
FHIS82
FASP112
FALA187
GHIS82
AASP112
GASP112
GALA187
HHIS82
HASP112
HALA187
IHIS82
IASP112
IALA187
JHIS82
JASP112
AALA187
JALA187
KHIS82
KASP112
KALA187
LHIS82
LASP112
LALA187
BHIS82
BASP112
BALA187
CHIS82
CASP112
CALA187

site_idSWS_FT_FI2
Number of Residues36
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU32
DGLU32
DHIS82
DASP112
EGLU32
EHIS82
EASP112
FGLU32
FHIS82
FASP112
GGLU32
AHIS82
GHIS82
GASP112
HGLU32
HHIS82
HASP112
IGLU32
IHIS82
IASP112
JGLU32
JHIS82
AASP112
JASP112
KGLU32
KHIS82
KASP112
LGLU32
LHIS82
LASP112
BGLU32
BHIS82
BASP112
CGLU32
CHIS82
CASP112

site_idSWS_FT_FI3
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:21685389
ChainResidueDetails
AGLY185
JGLY185
KGLY185
LGLY185
BGLY185
CGLY185
DGLY185
EGLY185
FGLY185
GGLY185
HGLY185
IGLY185

site_idSWS_FT_FI4
Number of Residues24
DetailsBINDING:
ChainResidueDetails
ATHR203
ELEU242
FTHR203
FLEU242
GTHR203
GLEU242
HTHR203
HLEU242
ITHR203
ILEU242
JTHR203
ALEU242
JLEU242
KTHR203
KLEU242
LTHR203
LLEU242
BTHR203
BLEU242
CTHR203
CLEU242
DTHR203
DLEU242
ETHR203

222926

PDB entries from 2024-07-24

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