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3ZYM

Structure of CALM (PICALM) in complex with VAMP8

Functional Information from GO Data
ChainGOidnamespacecontents
A0005543molecular_functionphospholipid binding
A0005545molecular_function1-phosphatidylinositol binding
A0030136cellular_componentclathrin-coated vesicle
A0030276molecular_functionclathrin binding
A0048268biological_processclathrin coat assembly
A0072583biological_processclathrin-dependent endocytosis
B0005543molecular_functionphospholipid binding
B0005545molecular_function1-phosphatidylinositol binding
B0030136cellular_componentclathrin-coated vesicle
B0030276molecular_functionclathrin binding
B0048268biological_processclathrin coat assembly
B0072583biological_processclathrin-dependent endocytosis
C0005543molecular_functionphospholipid binding
C0005545molecular_function1-phosphatidylinositol binding
C0030136cellular_componentclathrin-coated vesicle
C0030276molecular_functionclathrin binding
C0048268biological_processclathrin coat assembly
C0072583biological_processclathrin-dependent endocytosis
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 2001
ChainResidue
ATHR67
ATHR68
ALEU103
APHE104
AASN105
BASP224

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 2002
ChainResidue
AGLY89
AASN90
AILE46
AASN50
ATYR88

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 2001
ChainResidue
BTHR67
BTHR68
BLEU103
BPHE104
BASN105
CHOH3123

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 2002
ChainResidue
BILE46
BASN50
BTYR88
BGLY89
BASN90
BHOH3073

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 2001
ChainResidue
AASP224
CTHR67
CTHR68
CLEU103
CPHE104
CASN105

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 2002
ChainResidue
CILE46
CASN50
CTYR88
CGLY89
CASN90

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 C 2040
ChainResidue
BARG125
BARG126
BARG129
CLYS227
CLYS231

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 2039
ChainResidue
ATHR122
AARG125
AARG126
AARG129
AHOH3087

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 2039
ChainResidue
BHIS32
BHIS32
BARG66
BASN69
BHOH3021
BHOH3060
BHOH3064
BHOH3064
BHOH3066

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 C 2041
ChainResidue
CLYS38
CLYS40
CHIS41

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 2040
ChainResidue
ALYS38
ALYS40
AHIS41
AHOH3012

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 2040
ChainResidue
BLYS38
BLYS40
BHIS41
BHOH3013
BHOH3014

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 2041
ChainResidue
ATHR31
AHIS32
BLYS38

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues393
DetailsDomain: {"description":"ENTH","evidences":[{"source":"PROSITE-ProRule","id":"PRU00243","evidenceCode":"ECO:0000255"},{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q13492","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"Q13492","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsSite: {"description":"Interaction with STX8","evidences":[{"source":"UniProtKB","id":"Q9WUF4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9BV40","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues3
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q9BV40","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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