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3ZV5

CRYSTAL STRUCTURE OF CIS-BIPHENYL-2,3-DIHYDRODIOL-2,3-DEHYDROGENASE (BPHB) FROM PANDORAEA PNOMENUSA STRAIN B-356 COMPLEX WITH CO-ENZYME NAD AND PRODUCT 2,3-DIHYDROXYBIPHENYL

Functional Information from GO Data
ChainGOidnamespacecontents
A0016491molecular_functionoxidoreductase activity
A0016628molecular_functionoxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
A0018509molecular_functioncis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase activity
B0016491molecular_functionoxidoreductase activity
B0016628molecular_functionoxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
B0018509molecular_functioncis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues28
DetailsBINDING SITE FOR RESIDUE NAD A 1277
ChainResidue
AGLY12
AARG61
AASN86
AALA87
AGLY88
ATYR119
ATHR140
AILE141
ASER142
ATYR155
ALYS159
ASER15
APRO184
AGLY185
AGLY186
AMET187
ATHR189
AASP190
ALEU191
ABPY1278
AHOH2026
AGLY16
ALEU17
AASP36
ALYS37
AGLY58
AASP59
AVAL60

site_idAC2
Number of Residues24
DetailsBINDING SITE FOR RESIDUE NAD B 1277
ChainResidue
BGLY12
BSER15
BGLY16
BLEU17
BASP36
BLYS37
BGLY58
BASP59
BVAL60
BASN86
BTYR119
BTHR140
BILE141
BSER142
BTYR155
BLYS159
BPRO184
BMET187
BTHR189
BLEU191
BHOH2007
BHOH2022
BHOH2037
BHOH2060

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BPY A 1278
ChainResidue
ATRP90
ASER142
AASN143
AGLY150
ATYR155
AILE204
ANAD1277

Functional Information from PROSITE/UniProt
site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. SnagfypnggGplYTATKHAVvGLVrQMA
ChainResidueDetails
ASER142-ALA170

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10001","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues50
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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