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3ZQ5

Structure of the Y263F mutant of the cyanobacterial phytochrome Cph1

Functional Information from GO Data
ChainGOidnamespacecontents
A0006355biological_processregulation of DNA-templated transcription
A0009584biological_processdetection of visible light
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE CYC A 1521
ChainResidue
ALEU15
APHE216
AARG254
AALA256
ATYR257
ACYS259
AHIS260
APHE263
ATHR274
AHIS290
ATYR458
AMET174
ALEU469
AHOH2150
AHOH2160
AHOH2161
AHOH2192
AHOH2212
AHOH2306
AVAL186
ATYR203
ASER206
AASP207
AILE208
APRO209
AALA212

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 1522
ChainResidue
ATHR447
AASN449
AHOH2143
AHOH2144
AHOH2290
AHOH2291

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 1523
ChainResidue
AARG172
AMET195
AGLU196
AGLN292
AHOH2199

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 1524
ChainResidue
AHIS24
AVAL337
AARG358
AHOH2325
AHOH2326

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT A 1525
ChainResidue
AGLU196
ATYR198
ATYR203
AGLY451
ALEU477
AARG483
AHOH2296

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 1526
ChainResidue
AARG213
ALEU283
AHOH2128

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 1527
ChainResidue
ASER407
APRO488
ATRP489
AHOH2272

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1528
ChainResidue
AHIS24
APRO233
ALEU234
AALA237
AGLU333
AARG358
AHOH2179
AHOH2327

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1529
ChainResidue
AGLU162
AARG166
AASP190
AHOH2328

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 1530
ChainResidue
AGLY66
APHE69
AASP70
AHOH2042
AHOH2043

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues67
DetailsDomain: {"description":"PAS"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues168
DetailsDomain: {"description":"GAF"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues423
DetailsRegion: {"description":"Chromophore binding domain"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"description":"covalent","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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