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3ZDD

Structure of E. coli ExoIX in complex with the palindromic 5ov6 oligonucleotide and potassium

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0004519molecular_functionendonuclease activity
A0008409molecular_function5'-3' exonuclease activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0017108molecular_function5'-flap endonuclease activity
A0030955molecular_functionpotassium ion binding
A0033567biological_processDNA replication, Okazaki fragment processing
A0046872molecular_functionmetal ion binding
A0048256molecular_functionflap endonuclease activity
A0140640molecular_functioncatalytic activity, acting on a nucleic acid
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 1252
ChainResidue
ALEU171
AALA172
APRO180
AVAL182
AILE185
BDC13

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IPA A 1253
ChainResidue
AVAL114

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1254
ChainResidue
AARG229
AASP230
AHOH2213
ALYS156
APHE226

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01192
ChainResidueDetails
ALEU171
AALA172
APRO180
AVAL182
AILE185
AASP104

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PDB entries from 2024-06-12

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