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3ZD8

Potassium bound structure of E. coli ExoIX in P1

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0006261biological_processDNA-templated DNA replication
A0008409molecular_function5'-3' exonuclease activity
A0016787molecular_functionhydrolase activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0017108molecular_function5'-flap endonuclease activity
A0030955molecular_functionpotassium ion binding
A0033567biological_processDNA replication, Okazaki fragment processing
A0046872molecular_functionmetal ion binding
A0048256molecular_functionflap endonuclease activity
A0140097molecular_functioncatalytic activity, acting on DNA
B0000287molecular_functionmagnesium ion binding
B0003677molecular_functionDNA binding
B0003824molecular_functioncatalytic activity
B0004518molecular_functionnuclease activity
B0004519molecular_functionendonuclease activity
B0006261biological_processDNA-templated DNA replication
B0008409molecular_function5'-3' exonuclease activity
B0016787molecular_functionhydrolase activity
B0016788molecular_functionhydrolase activity, acting on ester bonds
B0017108molecular_function5'-flap endonuclease activity
B0030955molecular_functionpotassium ion binding
B0033567biological_processDNA replication, Okazaki fragment processing
B0046872molecular_functionmetal ion binding
B0048256molecular_functionflap endonuclease activity
B0140097molecular_functioncatalytic activity, acting on DNA
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K B 1251
ChainResidue
BLEU171
BALA172
BPRO180
BVAL182
BILE185

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K A 1252
ChainResidue
AILE185
AHOH2095
BHOH2012
ALEU171
AALA172
APRO180
AVAL182

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues178
DetailsDomain: {"description":"5'-3' exonuclease","evidences":[{"source":"HAMAP-Rule","id":"MF_01192","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues10
DetailsRegion: {"description":"Interaction with DNA","evidences":[{"source":"HAMAP-Rule","id":"MF_01192","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01192","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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