3X1K
crystal structure of Phosphoapantetheine adenylyltransferase PPAT/CoaD with AMP-PNP from Pseudomonas aerugonosa
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
A | 0009058 | biological_process | biosynthetic process |
A | 0015937 | biological_process | coenzyme A biosynthetic process |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
B | 0009058 | biological_process | biosynthetic process |
B | 0015937 | biological_process | coenzyme A biosynthetic process |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
C | 0003824 | molecular_function | catalytic activity |
C | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
C | 0009058 | biological_process | biosynthetic process |
C | 0015937 | biological_process | coenzyme A biosynthetic process |
C | 0016779 | molecular_function | nucleotidyltransferase activity |
D | 0003824 | molecular_function | catalytic activity |
D | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
D | 0009058 | biological_process | biosynthetic process |
D | 0015937 | biological_process | coenzyme A biosynthetic process |
D | 0016779 | molecular_function | nucleotidyltransferase activity |
E | 0003824 | molecular_function | catalytic activity |
E | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
E | 0005524 | molecular_function | ATP binding |
E | 0005737 | cellular_component | cytoplasm |
E | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
E | 0009058 | biological_process | biosynthetic process |
E | 0015937 | biological_process | coenzyme A biosynthetic process |
E | 0016779 | molecular_function | nucleotidyltransferase activity |
F | 0003824 | molecular_function | catalytic activity |
F | 0004595 | molecular_function | pantetheine-phosphate adenylyltransferase activity |
F | 0005524 | molecular_function | ATP binding |
F | 0005737 | cellular_component | cytoplasm |
F | 0008771 | molecular_function | [citrate (pro-3S)-lyase] ligase activity |
F | 0009058 | biological_process | biosynthetic process |
F | 0015937 | biological_process | coenzyme A biosynthetic process |
F | 0016779 | molecular_function | nucleotidyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE ANP A 1001 |
Chain | Residue |
A | TYR6 |
A | GLY88 |
A | ARG90 |
A | ASP94 |
A | GLU98 |
A | PRO119 |
A | TYR123 |
A | ILE126 |
A | SER127 |
A | SER128 |
A | THR129 |
A | GLY8 |
A | HOH1105 |
A | HOH1107 |
A | THR9 |
A | PHE10 |
A | GLY16 |
A | HIS17 |
A | LEU20 |
A | LYS41 |
A | ARG87 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE DMS A 1002 |
Chain | Residue |
A | ARG26 |
A | LEU27 |
C | ASN83 |
C | ASP111 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT A 1003 |
Chain | Residue |
A | ARG156 |
A | LYS158 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PO4 A 1004 |
Chain | Residue |
A | PRO110 |
A | VAL112 |
A | GLU113 |
C | ARG23 |
C | ARG26 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE DMS A 1005 |
Chain | Residue |
A | ASN83 |
A | ASP111 |
C | ARG26 |
C | LEU27 |
site_id | AC6 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE ANP B 1001 |
Chain | Residue |
B | TYR6 |
B | THR9 |
B | PHE10 |
B | GLY16 |
B | HIS17 |
B | LEU20 |
B | LYS41 |
B | ARG87 |
B | GLY88 |
B | ARG90 |
B | ASP94 |
B | GLU98 |
B | PRO119 |
B | TYR123 |
B | ILE126 |
B | SER127 |
B | SER128 |
B | THR129 |
B | HOH1102 |
B | HOH1103 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE DMS B 1002 |
Chain | Residue |
B | ALA36 |
B | ALA37 |
B | SER38 |
B | PRO39 |
B | PHE69 |
B | THR71 |
B | HOH1122 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE DMS B 1003 |
Chain | Residue |
B | GLY8 |
B | ALA36 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE DMS B 1004 |
Chain | Residue |
B | ASN83 |
B | ASP111 |
D | LEU27 |
site_id | BC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE FMT B 1005 |
Chain | Residue |
B | ARG156 |
site_id | BC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE FMT B 1006 |
Chain | Residue |
B | ARG156 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT B 1007 |
Chain | Residue |
B | THR58 |
B | LYS59 |
B | LEU61 |
B | VAL64 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT B 1008 |
Chain | Residue |
B | SER70 |
B | THR71 |
site_id | BC5 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE ANP C 1001 |
Chain | Residue |
C | TYR6 |
C | THR9 |
C | PHE10 |
C | GLY16 |
C | HIS17 |
C | LEU20 |
C | LYS41 |
C | ARG87 |
C | GLY88 |
C | ARG90 |
C | ASP94 |
C | GLU98 |
C | PRO119 |
C | TYR123 |
C | ILE126 |
C | SER127 |
C | SER128 |
C | THR129 |
C | HOH1102 |
C | HOH1110 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE DMS C 1002 |
Chain | Residue |
C | GLU22 |
C | TYR123 |
C | LYS15 |
C | GLY18 |
C | ASP19 |
site_id | BC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE PO4 C 1003 |
Chain | Residue |
C | LEU130 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 1004 |
Chain | Residue |
C | PRO7 |
C | GLY8 |
C | ALA36 |
C | ARG87 |
site_id | BC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE GOL C 1005 |
Chain | Residue |
C | ASP29 |
site_id | CC1 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE ANP D 1001 |
Chain | Residue |
D | TYR6 |
D | THR9 |
D | PHE10 |
D | GLY16 |
D | HIS17 |
D | LEU20 |
D | LYS41 |
D | ARG87 |
D | GLY88 |
D | ARG90 |
D | ASP94 |
D | GLU98 |
D | PRO119 |
D | TYR123 |
D | ILE126 |
D | SER127 |
D | SER128 |
D | THR129 |
D | HOH1108 |
D | HOH1110 |
site_id | CC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE DMS D 1002 |
Chain | Residue |
D | GLY8 |
D | ALA36 |
site_id | CC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE DMS D 1003 |
Chain | Residue |
D | LYS15 |
D | GLY18 |
D | ASP19 |
D | GLU22 |
D | TYR123 |
site_id | CC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE FMT D 1004 |
Chain | Residue |
D | SER93 |
site_id | CC5 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE ANP E 1001 |
Chain | Residue |
E | TYR6 |
E | GLY8 |
E | THR9 |
E | PHE10 |
E | GLY16 |
E | HIS17 |
E | LEU20 |
E | ARG87 |
E | GLY88 |
E | ARG90 |
E | GLU98 |
E | PRO119 |
E | TYR123 |
E | ILE126 |
E | SER127 |
E | SER128 |
E | THR129 |
E | HOH1112 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE DMS E 1002 |
Chain | Residue |
A | GLU133 |
E | LEU73 |
E | LEU101 |
site_id | CC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE DMS E 1003 |
Chain | Residue |
E | ARG26 |
E | LEU27 |
F | ASN83 |
F | ASP111 |
site_id | CC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE DMS E 1004 |
Chain | Residue |
E | LYS15 |
E | GLY18 |
E | ASP19 |
E | GLU22 |
E | TYR123 |
site_id | CC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE DMS E 1005 |
Chain | Residue |
E | PHE69 |
E | SER70 |
E | THR71 |
site_id | DC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE DMS E 1006 |
Chain | Residue |
E | ARG87 |
site_id | DC2 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE ANP F 1001 |
Chain | Residue |
F | TYR6 |
F | GLY8 |
F | THR9 |
F | PHE10 |
F | GLY16 |
F | HIS17 |
F | LEU20 |
F | ARG87 |
F | GLY88 |
F | ARG90 |
F | GLU98 |
F | PRO119 |
F | TYR123 |
F | ILE126 |
F | SER127 |
F | SER128 |
F | THR129 |
site_id | DC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE DMS F 1002 |
Chain | Residue |
F | LEU130 |
F | ILE134 |
site_id | DC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE DMS F 1003 |
Chain | Residue |
F | LEU72 |
F | LEU101 |
site_id | DC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE DMS F 1004 |
Chain | Residue |
F | LYS15 |
F | GLY18 |
F | ASP19 |
F | TYR123 |
F | HIS146 |