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3WY7

Crystal structure of Mycobacterium smegmatis 7-Keto-8-aminopelargonic acid (KAPA) synthase BioF

Functional Information from GO Data
ChainGOidnamespacecontents
A0008710molecular_function8-amino-7-oxononanoate synthase activity
A0009058biological_processbiosynthetic process
A0009102biological_processbiotin biosynthetic process
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
A0030170molecular_functionpyridoxal phosphate binding
B0008710molecular_function8-amino-7-oxononanoate synthase activity
B0009058biological_processbiosynthetic process
B0009102biological_processbiotin biosynthetic process
B0016740molecular_functiontransferase activity
B0016746molecular_functionacyltransferase activity
B0030170molecular_functionpyridoxal phosphate binding
C0008710molecular_function8-amino-7-oxononanoate synthase activity
C0009058biological_processbiosynthetic process
C0009102biological_processbiotin biosynthetic process
C0016740molecular_functiontransferase activity
C0016746molecular_functionacyltransferase activity
C0030170molecular_functionpyridoxal phosphate binding
D0008710molecular_function8-amino-7-oxononanoate synthase activity
D0009058biological_processbiosynthetic process
D0009102biological_processbiotin biosynthetic process
D0016740molecular_functiontransferase activity
D0016746molecular_functionacyltransferase activity
D0030170molecular_functionpyridoxal phosphate binding
Functional Information from PROSITE/UniProt
site_idPS00599
Number of Residues10
DetailsAA_TRANSFER_CLASS_2 Aminotransferases class-II pyridoxal-phosphate attachment site. TLSKALGSQG
ChainResidueDetails
ATHR232-GLY241

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AARG26
BHIS129
BSER175
BASP200
BTHR232
BTHR345
CARG26
CGLY104
CHIS129
CSER175
CASP200
AGLY104
CTHR232
CTHR345
DARG26
DGLY104
DHIS129
DSER175
DASP200
DTHR232
DTHR345
AHIS129
ASER175
AASP200
ATHR232
ATHR345
BARG26
BGLY104

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000250
ChainResidueDetails
ALYS235
BLYS235
CLYS235
DLYS235

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PDB entries from 2024-07-17

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