3WOL
Crystal structure of the DAP BII dipeptide complex I
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004175 | molecular_function | endopeptidase activity |
| A | 0004177 | molecular_function | aminopeptidase activity |
| A | 0006508 | biological_process | proteolysis |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008239 | molecular_function | dipeptidyl-peptidase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0042803 | molecular_function | protein homodimerization activity |
| A | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| A | 0070009 | molecular_function | serine-type aminopeptidase activity |
| B | 0004175 | molecular_function | endopeptidase activity |
| B | 0004177 | molecular_function | aminopeptidase activity |
| B | 0006508 | biological_process | proteolysis |
| B | 0008233 | molecular_function | peptidase activity |
| B | 0008239 | molecular_function | dipeptidyl-peptidase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0042802 | molecular_function | identical protein binding |
| B | 0042803 | molecular_function | protein homodimerization activity |
| B | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| B | 0070009 | molecular_function | serine-type aminopeptidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL A 803 |
| Chain | Residue |
| A | THR598 |
| B | GLY594 |
| B | HOH932 |
| A | PHE600 |
| A | ILE639 |
| A | HOH1040 |
| A | HOH1278 |
| A | HOH1463 |
| A | HOH1539 |
| A | HOH1668 |
| B | ASP593 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 804 |
| Chain | Residue |
| A | GLY68 |
| A | ARG175 |
| A | HOH1347 |
| A | HOH1361 |
| A | HOH1451 |
| A | HOH1642 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 805 |
| Chain | Residue |
| A | ARG413 |
| A | LEU535 |
| A | GLU539 |
| A | ARG542 |
| A | HOH980 |
| A | HOH1003 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 806 |
| Chain | Residue |
| A | ALA257 |
| A | ARG699 |
| A | ARG702 |
| A | HOH920 |
| A | HOH961 |
| A | HOH963 |
| A | HOH1498 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ZN A 807 |
| Chain | Residue |
| A | GLU635 |
| A | HIS665 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ZN A 808 |
| Chain | Residue |
| A | ASP59 |
| A | HIS252 |
| A | HOH1469 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 809 |
| Chain | Residue |
| A | GLU438 |
| A | HOH1483 |
| B | GLU505 |
| B | LYS508 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL B 803 |
| Chain | Residue |
| B | ALA257 |
| B | GLN259 |
| B | ARG699 |
| B | ARG702 |
| B | HOH926 |
| B | HOH944 |
| B | HOH1208 |
| site_id | AC9 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL B 804 |
| Chain | Residue |
| A | ASP593 |
| A | GLY594 |
| A | HOH926 |
| B | THR598 |
| B | PHE600 |
| B | ILE639 |
| B | HOH920 |
| B | HOH1046 |
| B | HOH1096 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 805 |
| Chain | Residue |
| A | GLU505 |
| A | LYS508 |
| B | GLU438 |
| B | HOH1246 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 806 |
| Chain | Residue |
| B | LYS47 |
| B | GLU635 |
| B | HIS665 |
| B | HOH1398 |
| site_id | BC3 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR LINKED RESIDUES A 801 to 802 |
| Chain | Residue |
| A | HIS86 |
| A | ASN215 |
| A | TRP216 |
| A | ARG220 |
| A | ASN330 |
| A | ILE652 |
| A | THR653 |
| A | GLY654 |
| A | GLY655 |
| A | SER657 |
| A | PHE673 |
| A | ASP674 |
| A | GLY675 |
| A | SER679 |
| A | HOH968 |
| A | HOH1307 |
| A | HOH1550 |
| A | HOH1588 |
| site_id | BC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR LINKED RESIDUES B 801 to 802 |
| Chain | Residue |
| B | HIS86 |
| B | ASN215 |
| B | TRP216 |
| B | ARG220 |
| B | ASN330 |
| B | ILE652 |
| B | THR653 |
| B | GLY654 |
| B | GLY655 |
| B | SER657 |
| B | PHE673 |
| B | ASP674 |
| B | GLY675 |
| B | SER679 |
| B | HOH1197 |
| B | HOH1253 |
| B | HOH1322 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | Active site: {"description":"Charge relay system","evidences":[{"source":"PubMed","id":"24598890","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"24827749","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"24827749","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
