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3WNJ

1.20 A resolution crystal structure of dioxygen bound copper-containing nitrite reductase from Geobacillus thermodenitrificans

Functional Information from GO Data
ChainGOidnamespacecontents
A0004322molecular_functionferroxidase activity
A0005507molecular_functioncopper ion binding
A0006807biological_processobsolete nitrogen compound metabolic process
A0016491molecular_functionoxidoreductase activity
A0030288cellular_componentouter membrane-bounded periplasmic space
A0046872molecular_functionmetal ion binding
A0050421molecular_functionnitrite reductase (NO-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU A 401
ChainResidue
AHIS95
ACYS135
AHIS143
AMET148

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU A 402
ChainResidue
AHOH856
AHIS100
AHIS134
AHIS294
AOXY408
AHOH821

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU A 403
ChainResidue
AHIS42
AGLU53
AHIS83
AHOH704
AHOH800

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CU A 404
ChainResidue
AHIS39

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU A 405
ChainResidue
AGLU239
AHOH628
AHOH770
AHOH813
AHOH814
AHOH853

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU A 406
ChainResidue
AASP167
AHOH693
AHOH741
AHOH806
AHOH843

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 407
ChainResidue
AASP40
AHOH815
AHOH835

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE OXY A 408
ChainResidue
AASP98
AHIS100
AHIS134
AHIS244
AVAL246
AHIS294
APHE296
ACU402
AHOH783
AHOH821
AHOH856

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MPD A 409
ChainResidue
AASP163
AVAL166
AASP167
AARG168
AGLU169
AARG229
AHOH719
AHOH803

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 410
ChainResidue
ALYS138
APRO139
AGLN300
AHOH560

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 411
ChainResidue
AASN158
AGLY159
ATYR160
AASP163
ALYS164
AHOH724
AHOH778

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 412
ChainResidue
AHIS262
ALEU263
AHOH750

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 413
ChainResidue
AMET270
AHOH850
AHOH850
AHOH850

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 414
ChainResidue
ALYS22
AGLY23
ALYS61
AHOH683
AHOH852

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACY A 415
ChainResidue
APRO290
AHOH716
AHOH783
AHOH857

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACY A 416
ChainResidue
AASP55
ALYS56
ATHR212
APHE213
AHOH583

site_idBC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACY A 417
ChainResidue
ALYS127
APRO128
AASN258
AASN260
AHOH572
AHOH754
AHOH804
AHOH805

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY A 418
ChainResidue
AARG168
ALYS223
ATHR312
AGLU314
AHOH840
AHOH841

221051

PDB entries from 2024-06-12

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