Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3WK0

Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE O7M A 301
ChainResidue
AASP20
ASER127
APRO180
AGLN185
AGLY202
AARG203
AHOH402
AHOH403
AHOH406
AHOH407
AHOH408
ALYS42
AHOH411
AASP70
ALYS72
AASP75
AILE76
ATHR79
AILE96
AMET126

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
ATHR159
APRO161
AGLY186
AASN210
AHOH427
AHOH428

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 303
ChainResidue
AALA208
AASP209
AASN210
AALA213
AALA214

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIaDfKvaDIPeTN
ChainResidueDetails
AILE67-ASN80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor
ChainResidueDetails
ALYS72

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING:
ChainResidueDetails
AASP20
ALYS42
AASP70
ASER127
APRO180
AGLY202
AARG203

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon