3WIC
Structure of a substrate/cofactor-unbound glucose dehydrogenase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0005536 | molecular_function | glucose binding |
A | 0008270 | molecular_function | zinc ion binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019595 | biological_process | non-phosphorylated glucose catabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0047934 | molecular_function | glucose 1-dehydrogenase (NAD+) activity |
A | 0047935 | molecular_function | glucose 1-dehydrogenase (NADP+) activity |
A | 0047936 | molecular_function | glucose 1-dehydrogenase [NAD(P)] activity |
A | 0070401 | molecular_function | NADP+ binding |
A | 0070403 | molecular_function | NAD+ binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0005536 | molecular_function | glucose binding |
B | 0008270 | molecular_function | zinc ion binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019595 | biological_process | non-phosphorylated glucose catabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0047934 | molecular_function | glucose 1-dehydrogenase (NAD+) activity |
B | 0047935 | molecular_function | glucose 1-dehydrogenase (NADP+) activity |
B | 0047936 | molecular_function | glucose 1-dehydrogenase [NAD(P)] activity |
B | 0070401 | molecular_function | NADP+ binding |
B | 0070403 | molecular_function | NAD+ binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0005536 | molecular_function | glucose binding |
C | 0008270 | molecular_function | zinc ion binding |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0019595 | biological_process | non-phosphorylated glucose catabolic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0047934 | molecular_function | glucose 1-dehydrogenase (NAD+) activity |
C | 0047935 | molecular_function | glucose 1-dehydrogenase (NADP+) activity |
C | 0047936 | molecular_function | glucose 1-dehydrogenase [NAD(P)] activity |
C | 0070401 | molecular_function | NADP+ binding |
C | 0070403 | molecular_function | NAD+ binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0005536 | molecular_function | glucose binding |
D | 0008270 | molecular_function | zinc ion binding |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0019595 | biological_process | non-phosphorylated glucose catabolic process |
D | 0046872 | molecular_function | metal ion binding |
D | 0047934 | molecular_function | glucose 1-dehydrogenase (NAD+) activity |
D | 0047935 | molecular_function | glucose 1-dehydrogenase (NADP+) activity |
D | 0047936 | molecular_function | glucose 1-dehydrogenase [NAD(P)] activity |
D | 0070401 | molecular_function | NADP+ binding |
D | 0070403 | molecular_function | NAD+ binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ZN A 1001 |
Chain | Residue |
A | CYS41 |
A | HIS68 |
A | GLU69 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 1002 |
Chain | Residue |
A | CYS99 |
A | CYS102 |
A | CYS110 |
A | ASP116 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGO A 1003 |
Chain | Residue |
A | ARG130 |
A | ILE133 |
A | TYR134 |
A | ARG95 |
A | HIS126 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE 1PE A 1004 |
Chain | Residue |
A | ILE104 |
A | ARG106 |
A | HOH1110 |
B | GLN178 |
C | LYS173 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE 1PE A 1005 |
Chain | Residue |
A | ILE137 |
A | LEU140 |
A | LYS142 |
A | ASN144 |
A | LYS309 |
A | VAL313 |
B | ASP181 |
B | ILE185 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 1001 |
Chain | Residue |
B | CYS41 |
B | HIS68 |
B | GLU69 |
B | HOH1106 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 1002 |
Chain | Residue |
B | CYS99 |
B | CYS102 |
B | CYS110 |
B | ASP116 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PGO B 1003 |
Chain | Residue |
B | ARG95 |
B | HIS126 |
B | ARG130 |
B | ILE133 |
B | TYR134 |
B | ASP135 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PGO B 1004 |
Chain | Residue |
B | PHE88 |
B | ASP145 |
B | PRO146 |
B | LEU148 |
B | GLY149 |
B | HOH1148 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE 1PE B 1005 |
Chain | Residue |
A | GLN178 |
A | HOH1143 |
B | ARG106 |
B | GLU166 |
B | HIS311 |
B | HOH1141 |
D | LYS173 |
D | ARG174 |
site_id | BC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE 1PE B 1006 |
Chain | Residue |
A | ILE185 |
B | TYR82 |
B | ILE137 |
B | GLN138 |
B | LEU140 |
B | VAL141 |
B | LYS142 |
B | ASN144 |
B | LYS309 |
site_id | BC3 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE 1PE B 1007 |
Chain | Residue |
B | LYS173 |
B | ARG174 |
B | HOH1107 |
B | HOH1139 |
C | LYS173 |
C | ILE176 |
C | GLN178 |
C | ASN179 |
D | ILE104 |
D | ARG106 |
D | HOH1119 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN C 1001 |
Chain | Residue |
C | CYS41 |
C | HIS68 |
C | GLU69 |
C | GLU156 |
site_id | BC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN C 1002 |
Chain | Residue |
C | CYS99 |
C | CYS102 |
C | CYS110 |
C | ASP116 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PGO C 1003 |
Chain | Residue |
C | ARG95 |
C | HIS126 |
C | ARG130 |
C | ILE133 |
C | TYR134 |
C | HOH1109 |
site_id | BC7 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE 1PE C 1004 |
Chain | Residue |
A | LYS173 |
A | ARG174 |
A | HOH1115 |
C | ILE104 |
C | LYS173 |
C | HOH1160 |
D | LYS173 |
D | ILE176 |
D | GLN178 |
D | ASN179 |
D | SER182 |
site_id | BC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE 1PE C 1005 |
Chain | Residue |
C | ILE137 |
C | LEU140 |
C | VAL141 |
C | LYS142 |
C | LYS309 |
C | HOH1151 |
D | ASP181 |
D | ILE185 |
C | TYR82 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN D 1001 |
Chain | Residue |
D | CYS41 |
D | HIS68 |
D | GLU69 |
D | GLU156 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN D 1002 |
Chain | Residue |
D | CYS99 |
D | CYS102 |
D | CYS110 |
D | ASP116 |
site_id | CC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PGO D 1003 |
Chain | Residue |
D | ALA120 |
D | HIS126 |
D | PHE128 |
D | ARG130 |
D | TYR134 |
D | ASP135 |
site_id | CC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGO D 1004 |
Chain | Residue |
D | PHE88 |
D | ASP145 |
D | PRO146 |
D | LEU148 |
D | GLY149 |
site_id | CC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE 1PE D 1005 |
Chain | Residue |
C | ASN179 |
C | ASP181 |
D | ILE137 |
D | LEU140 |
D | LYS142 |
D | ASN144 |
D | LYS309 |
D | VAL313 |
D | ASP317 |
D | HOH1155 |