3VX3
Crystal structure of [NiFe] hydrogenase maturation protein HypB from Thermococcus kodakarensis KOD1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0016226 | biological_process | iron-sulfur cluster assembly |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| A | 0140663 | molecular_function | ATP-dependent FeS chaperone activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0016226 | biological_process | iron-sulfur cluster assembly |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016887 | molecular_function | ATP hydrolysis activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051536 | molecular_function | iron-sulfur cluster binding |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| B | 0140663 | molecular_function | ATP-dependent FeS chaperone activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE ADP A 301 |
| Chain | Residue |
| A | GLY30 |
| A | TYR219 |
| A | ASP223 |
| A | HOH411 |
| A | HOH414 |
| A | HOH436 |
| B | LYS28 |
| B | SER160 |
| B | LEU162 |
| A | VAL31 |
| A | GLY32 |
| A | LYS33 |
| A | SER34 |
| A | LEU35 |
| A | ASN187 |
| A | PRO217 |
| A | PHE218 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 302 |
| Chain | Residue |
| A | LYS28 |
| A | GLY29 |
| B | LYS28 |
| B | GLY29 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 303 |
| Chain | Residue |
| A | ASP139 |
| A | HOH473 |
| B | GLY107 |
| B | ILE110 |
| B | ASP139 |
| B | GLN140 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 304 |
| Chain | Residue |
| A | GLY68 |
| A | GLY227 |
| A | ASN228 |
| A | HOH470 |
| site_id | AC5 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE ADP B 301 |
| Chain | Residue |
| A | LYS28 |
| A | SER160 |
| A | LEU162 |
| B | GLY29 |
| B | GLY30 |
| B | VAL31 |
| B | GLY32 |
| B | LYS33 |
| B | SER34 |
| B | LEU35 |
| B | ASN187 |
| B | MET188 |
| B | PRO217 |
| B | PHE218 |
| B | TYR219 |
| B | ASP223 |
| B | VAL226 |
| B | HOH408 |
| B | HOH414 |
| B | HOH422 |
| B | HOH433 |
| B | HOH443 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO B 302 |
| Chain | Residue |
| B | TYR219 |
| B | PRO220 |
| B | ASP221 |
| B | LEU222 |
| B | LYS225 |
| B | HOH415 |
| B | HOH463 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 303 |
| Chain | Residue |
| B | LYS175 |
| B | LYS180 |
| B | VAL181 |
| B | GLY209 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 304 |
| Chain | Residue |
| A | GLU176 |
| B | TYR97 |
| B | ALA113 |
| B | GLU116 |
| B | LEU117 |
| B | ILE120 |
