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3VW2

Crystal Strucuture of The Berberine-bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
B0003677molecular_functionDNA binding
C0003677molecular_functionDNA binding
D0003677molecular_functionDNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE BER A 301
ChainResidue
ATHR85
AALA110
AVAL138
AASP152
APHE155
AMET184

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
AALA101
AARG102
AGLN19
AHIS99
APRO100

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BER B 301
ChainResidue
BLYS63
BTHR85
BVAL138
BASP152
BPHE155
BLEU188
BTHR189

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 302
ChainResidue
BGLN19
BHIS99
BPRO100
BALA101
BARG102

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE BER C 301
ChainResidue
CTHR85
CVAL138
CASP152
CPHE155
CMET184

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 302
ChainResidue
CGLN19
CHIS99
CPRO100
CALA101
CARG102

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE BER D 301
ChainResidue
DLYS63
DTHR85
DTYR92
DILE106
DVAL138
DASP152
DPHE155
DLEU156
DMET184
DLEU188

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 302
ChainResidue
DGLN19
DASN98
DHIS99
DPRO100
DALA101
DARG102

Functional Information from PROSITE/UniProt
site_idPS01081
Number of Residues31
DetailsHTH_TETR_1 TetR-type HTH domain signature. GIaa.STavIarnagVAeGtLFrYFaTKdelI
ChainResidueDetails
AGLY25-ILE55

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PDB entries from 2024-07-17

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