3VSN

The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0016829	molecular_function	lyase activity
A	0019031	cellular_component	viral envelope
A	0030430	cellular_component	host cell cytoplasm
A	0042025	cellular_component	host cell nucleus
A	0044423	cellular_component	virion component
A	0055036	cellular_component	virion membrane

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 801

Chain	Residue
A	HOH1055
A	HOH1171

---

site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 802

Chain	Residue
A	LEU362
A	LEU362

---

site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 803

Chain	Residue
A	GLU671
A	ALA673

---

site_id	AC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 806

Chain	Residue
A	ASN664

---

site_id	AC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 807

Chain	Residue
A	ASN652

---

site_id	AC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 808

Chain	Residue
A	GLU619

---

site_id	AC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 809

Chain	Residue
A	LYS478
A	GLU508

---

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 811

Chain	Residue
A	GLY298
A	MET343
A	GOL828

---

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 813

Chain	Residue
A	PRO334
A	TYR360
A	IOD854

---

site_id	BC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 814

Chain	Residue
A	ASN153

---

site_id	BC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 815

Chain	Residue
A	ASN634

---

site_id	BC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 816

Chain	Residue
A	ARG81
A	IOD818
A	HOH1404

---

site_id	BC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 818

Chain	Residue
A	LYS84
A	IOD816

---

site_id	BC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 819

Chain	Residue
A	HIS128

---

site_id	BC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 821

Chain	Residue
A	ASN280

---

site_id	BC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 822

Chain	Residue
A	HIS496
A	HOH1208

---

site_id	BC8
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GOL A 823

Chain	Residue
A	TYR89
A	ASN356
A	PHE357
A	ILE358
A	THR359
A	LYS378
A	IOD854
A	HOH1026
A	HOH1436
A	HOH1499

---

site_id	BC9
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GOL A 824

Chain	Residue
A	ASN516
A	LEU674
A	GLN675
A	ILE703
A	VAL704
A	HOH1067
A	HOH1109
A	HOH1171
A	HOH1330
A	HOH1439

---

site_id	CC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL A 825

Chain	Residue
A	ASN563
A	ILE564
A	ASN565
A	HOH908
A	HOH966

---

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 826

Chain	Residue
A	THR655
A	LYS689
A	LEU690
A	SER693

---

site_id	CC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 827

Chain	Residue
A	VAL364
A	LYS466
A	THR467
A	ASP468
A	LYS645
A	HOH920

---

site_id	CC4
Number of Residues	10
Details	BINDING SITE FOR RESIDUE GOL A 828

Chain	Residue
A	HIS291
A	ARG295
A	ALA296
A	MET343
A	ARG345
A	GLU395
A	TRP407
A	IOD811
A	IOD866
A	HOH1273

---

site_id	CC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 829

Chain	Residue
A	ILE584
A	ALA673
A	HOH1171
A	HOH1495

---

site_id	CC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE GOL A 830

Chain	Residue
A	ASN102
A	ASN104

---

site_id	CC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 832

Chain	Residue
A	THR321
A	HOH957

---

site_id	CC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 834

Chain	Residue
A	ARG259

---

site_id	CC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 835

Chain	Residue
A	TRP216
A	HOH1239
A	HOH1317

---

site_id	DC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 836

Chain	Residue
A	SER115
A	TRP117

---

site_id	DC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 839

Chain	Residue
A	VAL683

---

site_id	DC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 841

Chain	Residue
A	ASN541

---

site_id	DC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 842

Chain	Residue
A	IOD861

---

site_id	DC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 843

Chain	Residue
A	GLY605

---

site_id	DC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 844

Chain	Residue
A	HOH1160

---

site_id	DC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 845

Chain	Residue
A	ARG103
A	ASN104
A	IOD846

---

site_id	DC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 846

Chain	Residue
A	ARG103
A	ASN113
A	IOD845

---

site_id	DC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 847

Chain	Residue
A	TRP105
A	ASN104

---

site_id	EC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 849

Chain	Residue
A	HIS231

---

site_id	EC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 850

Chain	Residue
A	GLY229

---

site_id	EC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IOD A 851

Chain	Residue
A	ARG214
A	ARG251
A	IOD852
A	HOH1166

---

site_id	EC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 852

Chain	Residue
A	IOD851

---

site_id	EC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE IOD A 854

Chain	Residue
A	GLY355
A	ILE358
A	IOD813
A	GOL823
A	HOH1422
A	HOH1436

---

site_id	EC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 855

Chain	Residue
A	THR348
A	HOH1339

---

site_id	EC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 856

Chain	Residue
A	ASN422
A	HOH1211

---

site_id	EC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE IOD A 857

Chain	Residue
A	ASN352
A	HOH1131
A	HOH1476

---

site_id	EC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 859

Chain	Residue
A	ILE420

---

site_id	FC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 861

Chain	Residue
A	SER534
A	IOD842

---

site_id	FC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 863

Chain	Residue
A	ASN691

---

site_id	FC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE IOD A 866

Chain	Residue
A	ARG295
A	GLY341
A	VAL342
A	MET343
A	TRP407
A	GOL828

---

site_id	FC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 870

Chain	Residue
A	ASN514
A	TYR591

---

site_id	FC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE IOD A 872

Chain	Residue
A	ASN302

---

site_id	FC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 873

Chain	Residue
A	ASN565
A	HOH1495

---

site_id	FC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 874

Chain	Residue
A	THR655
A	THR656

---

site_id	FC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 875

Chain	Residue
A	ARG572
A	SER573

---

site_id	FC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 876

Chain	Residue
A	SER576
A	SER577

---

site_id	GC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 879

Chain	Residue
A	GLN461
A	GLU653

---

site_id	GC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE IOD A 881

Chain	Residue
A	SER568
A	IOD882

---

site_id	GC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE IOD A 882

Chain	Residue
A	GLU547
A	LEU569
A	IOD881
A	HOH1162

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"24512853","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	Active site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"24512853","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	Site: {"description":"Transition state stabilizer","evidences":[{"source":"PubMed","id":"24512853","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	Site: {"description":"Important for catalytic activity","evidences":[{"source":"PubMed","id":"24512853","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---